EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-01691

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:54776220-54777970

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:54776239-54776259

TCCCAACACACCCCAACCCA

6.53

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_04187	chr1:54776373-54777855	Brain_Anterior_Caudate
SE_04901	chr1:54774434-54776398	Brain_Cingulate_Gyrus
SE_05919	chr1:54774524-54779362	Brain_Hippocampus_Middle
SE_26701	chr1:54776623-54778035	Esophagus
SE_29698	chr1:54777447-54779582	Fetal_Muscle
SE_31383	chr1:54776461-54777884	Gastric
SE_33414	chr1:54774301-54778011	H2171
SE_41585	chr1:54777200-54777932	LNCaP
SE_42582	chr1:54776432-54778037	Lung
SE_46626	chr1:54776441-54777114	Ovary
SE_46626	chr1:54777164-54777789	Ovary
SE_63284	chr1:54754699-54809827	NCI-H82
SE_65414	chr1:54776428-54777135	Pancreatic_islets
SE_66951	chr1:54774301-54778011	H2171
SE_68686	chr1:54774668-54777941	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I054309

chr1

54775274

54781137

Enhancer Sequence

CCTGCATTAG CTAAACCATT CCCAACACAC CCCAACCCAC TTCCTCCCTC CCCCACCCTC 60
ACAGTTTTAA TTGGGGTAAG TGGCTCCCTG ATGCAATCTG CAAAGCACCA GCCCAGACCA 120
GGGCAAGAGC AAGAGCTAAG TGGAATAGTG GGGCTGGGTG GGTGGGCCTA GAGAGTTCCA 180
ACTCTGTGCT TCCACTCACC ACTATTTTAC AGATTCAAGT ACAGTATTTC CACTTGCTGG 240
TCTTTTCAAA CAACTGAAAT ACCTATACCA CCTGTGAGGA TGGGGGGAGA ACCACCCCCG 300
CTTTATGCAG TGAGGGAGCT GAGCTGACTC ACTGGGAGCA TGCAGATTGG CAGTGGTGAG 360
CATGAATGCT TTTGGGTCTG GGTCTCCGTG TGGGGGCTGA CATCACCTGG AAGGACCGCA 420
GGTCCCCACC CACAATCTCT CTAGAACTCT TGGGCAATAA GAAATCTGTG GCTTGATGTC 480
TTCCAAGCCA CACATGCTTG GGTCTATTTC GCGGACCCTA ATCGATGGCT GACTTCTTTA 540
GCCTGCTGAC CAGAGCCGAT TCTTTGATGG GAAAACAAGG TGGGGGACAC ATCATGGGGA 600
GAGAACTGGC CATCCCAGAA GGGGGCAGCA GAGGGAAGGT CTGGCGCTGG GCAGCCTCTG 660
GGCTCAAGAC GGAAATCCAC CACCAGTGAA GACCAGGGTC CTCCCTGACT TAATGCACCA 720
ACTGCTGAGA ACACCATAGG AAGGGCTGAG ATGGAGTGTT CCCTGCTTCG GAACAGAAGC 780
CAAGAAGGAG AGAGGCAGCA GTGTGGAGGG TCTGTCATGT CAAAGTGGGT CCAAGCCCTA 840
CTGGGCCCCC AGGCCCTGGG AAACTTTCCA GGCAAAGTGA AGACAATCAC CCTGCCTGCC 900
TGACTTGCAG GACCTGTCGT GAGGCTCCTC CAGGGACAAT GGAGGTAAAA GAGCTTGAAA 960
AACTATTAAA GGACCTACCC ACAAGATGTC AAAATCGAGA CAACCCTGCC TACCTCATGG 1020
GGCCCATTGA GAGCATGTGA GCCAGCCCCA CAGCCCCCAA GGGTAAGACA CCCATAGCTG 1080
CAGCATCACC ACCGTCACTC GGAGGGGCGG CAGACTCAGG AGGGCAGCCT GACCACACTG 1140
AGCAGCAGCC CTCCTGTCCT ACCCTGCACC CGTGCCGAGT CAGAGTCTCC AATTTCTAAG 1200
GTTTTTGGCT GGAGAATGAG CCAAACCATC ATCACTATAA AAAAGCAAGG AGGTGGCATG 1260
TAGAAATAGT CCTTGTATGA CTCTACCCAA AGCAAGCTCT GTGTTGTTCC CCGGAGCCAC 1320
AGTTCTGGGG ACTCCTTGAC CATCTACAGC AGCCAAGGCC CCTGCCCAGC GCACTCACAG 1380
CTGGGGAGAC TCTCAGATCC ATCTAAGCCT AAACCCAAGA CTGCCTCTCT CCAGCATCCA 1440
CCGGCTGATT TGCCTCCACA GAAAAGGGGC TCCAGCACAT AGCACCAGCT CTGAGCTCTG 1500
TAGTATTTCA AAAGAAAGTC TTGCTGGGGG CAAGTGGCCA AAGAGGGCTT CCCTTCTCAA 1560
GGAGGGTGCA GCTTGGGATG TGTGTTAAAG AATATGCAGT GGCCAGGCAC AATGGCTCAT 1620
GCCTGTAATC CCAGTGCTTT GGGAGGCGGG GGATCAGTGG AGGTCAGGAG TTTGAGGTTA 1680
CAGTGAGATA TGGATCGCAC CACTGCACTC CAGCCTAGGT GACAGGGTGA GATACTCTCT 1740
CTTTAAAAAA 1750