EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-01604

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:46648410-46649860

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:46649391-46649410

TTGCCAGCAGGTGGAACCT

6.1

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_23257	chr1:46648290-46652274	Colon_Crypt_1
SE_24097	chr1:46648311-46650828	Colon_Crypt_2
SE_31897	chr1:46645550-46652335	Gastric
SE_34180	chr1:46645443-46651019	HCC1954
SE_41846	chr1:46645690-46648609	LNCaP
SE_41846	chr1:46648685-46648984	LNCaP
SE_41846	chr1:46649005-46651848	LNCaP
SE_50730	chr1:46644589-46652277	Sigmoid_Colon
SE_65807	chr1:46648144-46650755	Pancreatic_islets

Enhancer Sequence

TAGTTCTGAT GTGGTCTGTG CCTTGGGCTT CCTTCGGCTG CAGGGAACTT GTGTTTTTGT 60
TGTTGTTGTT GTTGTTGTTT GTTTCTTTGA GACAGGATCT TGCTTTGTCA CCAAAGCTGG 120
AGTGCAGTGG CATGATCATG GCTTACTGCA GCGTCAACCT CCTGGGCTCA AGGGATTCCC 180
CTACCTCACT CAGCCTCCTG AGTATCTAGG ACTACAGGAG TGTGCCACCA TGCTCAGCTA 240
ATTAAAAAAA ATTTTTTTTG TAGAGGCGGT CTCACTATAT TGCCCAGGCT GGTCTCGAAC 300
TCCTGGACTT AAGTGATTCT CCCACCTCTG CCTCCCAAAG TGCGGGGATT ACAGGCATGA 360
GCCACTGTGC CAGTCCTGAA CTAGTCTTTA TCCCTGTATC TGGAGGAAGC AATAGGATTC 420
CAGGGATTTG GACAGGAGAG GCTCTGCCCT GAGAGGGTTA AAGGCAAATC CGGTTTGATT 480
TCTGGCCTCT GTTACCCAGA CCTTGCCAGG CTGGGCAAAG CAGGATAGGG CAGACCTCCA 540
GCTCCATGAA ATTTGACCCT GCAGGCTAGA AGTCCAGCTT TCTGTCCTTG GGCAAACATG 600
CCTGGAATCC AGCCACAATC TGCCACCTCA CTTCCCGTTC TAGCCTCAGT TTTTATAGCT 660
GGCAAGTGAG GACTAGTCAC CAAGGTGGTG TCAGGCTGAT TCATCCACTG AAGCCCTGGG 720
CCGGGAGGCT TTCCTCTAAG ATCTGTGGGA ACTGCGCAGG GCCCTCCTCA ATCTAGGCCT 780
CAGAATTCCC CCTGAGGTTT GGAGTTGAGC TAGACAGCCT TTAAGAGAAG CTCTGGCTGT 840
ATTCCCACTG GTACCTCACT TTCCTCTTGT GAGGCAAGGA GGTCTTGTCT ACATGAGGGG 900
CGGGCCTGAA GTTGGATTCT GGAGGGGAGC CAAATGGGGC CTCAGGTGGG TGAACCTTCT 960
CAACCTCCTC CCTCTCCAAG GTTGCCAGCA GGTGGAACCT CAGCCTCGCC TCCATTACTA 1020
TGGTGACTAT TGAGCCTGTT CTGCTACCAC CCCCGTCTCC ACCTATCAGA GGACAGAGGT 1080
GTTCTAGGCA CCCATAGCCC AGAAAGGAAA TAGGAGGCTG GGCCCTCACC TGCCTGTTTT 1140
CAATCCTAGC TATGTGGCAG GACCCTGGCA GCAGTGAGGG AAAGTCTTGC CCCTCTGCCC 1200
ACCCTGAGGA TATTTCTAGA ACCCCTGATC TCCTTTATAT CTGCCCAGGT GTGCAGCCTG 1260
GTCCTAGCTA TGCATATCCC AGCTCCCATT TTTCTGGCTC TAGAGGATGT TTCCCTCCTT 1320
ACAGGATGAG GTTTTAGACT CCCTAGCCAA TAAAGAGGGA AGTTTCTCGG CTCCCATCCT 1380
TCTTACTCAG CTGTGTGGTA GTAAGCTACT TGCCAGCACT GTTTAAGGCC TGCCTGACCT 1440
CTCTCTCCCC 1450