Tag | Content |
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EnhancerAtlas ID | HS040-01027 |
Organism | Homo sapiens |
Tissue/cell | Esophagus |
Coordinate | chr1:25892830-25893330 |
Target genes | Number: 10 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr1:25893015-25893035 | CCCCACCCCACCCCCACCCC | + | 8.54 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_02010 | chr1:25890927-25896559 | Aorta | SE_03472 | chr1:25890604-25897057 | Brain_Angular_Gyrus | SE_04384 | chr1:25883710-25897130 | Brain_Anterior_Caudate | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | SE_06990 | chr1:25882590-25898188 | Brain_Hippocampus_Middle_150 | SE_08141 | chr1:25882606-25897422 | Brain_Inferior_Temporal_Lobe | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | SE_53664 | chr1:25874991-25896829 | Spleen | SE_65397 | chr1:25887914-25896024 | Pancreatic_islets |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I025565 | chr1 | 25891281 | 25897035 |
|
Enhancer Sequence | CTCGTAAACA CCTCTTCCAT TGACTGCCTA ACATTCTCTT AAGGGAAGCT GCTATAATTT 60 ACTTGACTCT CCCCTATTCT TTTGGACATG TAGGTTGTCT CCCTTTGTAA ATTTATTTTT 120 CGAACAGCAC GGTGTTGACA CAGTTATAGC CAAAGAATCT TCCGTGTTCC CTCCCACAGC 180 TTGTTCCCCA CCCCACCCCC ACCCCCGCTG CTCCCTTTAC CAGCCCCTTC TCCTCTTTCC 240 TGGGCATGTC CTGACTGAGC TGGGGCACAG AGTGGGTGCT CTGGCCTCTC CCGGGGGTGG 300 GTGCACCGCT GGCTGCCCCT GACTTTTCTG AGCTGTTTGA CTCTCAAGGG GAGGTGCTTT 360 GATCTGAGGT TACTCCACCT CCCCTGCACC GGGGGCTTCC TTCTTGGGCC ATGTGCCCTG 420 CTGTTCCCCA CTGGTGCCCC CTCGCGTCTG ACCCTGGGGC GCGCCAGCCC TCACCCAGGC 480 TCTCGGCTCA CACAGCTCTG 500
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