EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-00942

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:23711300-23712140

Target genes

Number: 12
Name	Ensembl ID

RP5	ENSG00000215381
HNRNPR	ENSG00000125944
C1orf213	ENSG00000249087
ZNF436	ENSG00000125945
TCEA3	ENSG00000204219
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
ID3	ENSG00000117318
RPL11	ENSG00000142676
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_27061	chr1:23711394-23712013	Esophagus
SE_40292	chr1:23711277-23712051	K562
SE_46713	chr1:23711621-23711908	Ovary
SE_53272	chr1:23711334-23712114	Small_Intestine

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I023383

chr1

23710092

23712491

Enhancer Sequence

AGGCGCCCGC CACCACGCCC GGCTAATTTG GACTTTCACT CTTGTTGGTC ACTCTTGTTG 60
ATCTTTTGTA ACAGACCTCT CTTCTCTTGC CTCAAGACTT ATCTCCTACA GGAAGTATTC 120
CCTGACTCAC CCCTGAACAC ATCCTACTGG ACAAGTTCAC AGGAGTGAGC TGCAAGCAGG 180
CTTAGCGGTC TAGTTCATCT TCCTTATTTT ACTGGTGGAA GACCTGAGGC CCAGAGAGGG 240
AAAGTCCTAA ATATCATTGG GACTATTTAA TGTTACATTT TCTCATCCTC TTAGCCTCAT 300
CATTCAGGTG CAGGAACCGG GTATCCCACA GTAAAGCCCT GGCATTTCCA GGTTTAACAG 360
CTCCTGTTCT GGTTTTCTAA GGCTGTCCTT GGCTGGCCAC GACATGTAGC AAGTCATTAC 420
TTTGCTGACA ATCAGCTACG AATGATGTCA GCTGGGAATC TGTGGTGTGG GACGAGTTAT 480
GCCCGCCACC CTCCTTGGGT GAGCCCCAGC AGCCCAGCAG TCTGCCAGGC GGACACAGCT 540
TAGCGCAGCC TGGTCACTGG AAAGCAGTGA CGAGCAGAGA GAAAACTTTG CTAGTGGGCA 600
GTTTACTTCT AGAAAGAAGT GAGGCACAGG AAGCGCATCA CTCCACACGG AAAGGTGCTT 660
GGGAGAGAGC AGAAGCTTGC ACAAACATCT CCGGATTCCA GAACTGGAAT TCTCCAAGGG 720
ACTCCTCCGG AATGGCAAGG CTGACTGCAT TTCTGCCCTG GCCACAGAAT GCCGCAGGCA 780
AGGTGCTCTT GATAAATGGT GTGTGCCGAA CAGACGGAGA ACTCTGAATA GAGTTCTAGA 840