Tag | Content |
---|
EnhancerAtlas ID | HS040-00687 |
Organism | Homo sapiens |
Tissue/cell | Esophagus |
Coordinate | chr1:17890530-17892930 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr1:17891101-17891116 | TGGGTTCAAAGGCCA | + | 6.53 | MYCN | MA0104.4 | chr1:17891089-17891101 | AGCCACGTGGCC | + | 6.37 | MYCN | MA0104.4 | chr1:17891089-17891101 | AGCCACGTGGCC | - | 6.37 | ZNF263 | MA0528.1 | chr1:17891863-17891884 | TTCCCTTCTCCCTCCTGCTTA | - | 6.14 |
|
| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_00612 | chr1:17885040-17898127 | Adipose_Nuclei | SE_01537 | chr1:17887238-17903710 | Aorta | SE_03096 | chr1:17890604-17891914 | Bladder | SE_06186 | chr1:17884729-17903611 | Brain_Hippocampus_Middle | SE_23081 | chr1:17890473-17892557 | Colon_Crypt_1 | SE_23747 | chr1:17890421-17891202 | Colon_Crypt_2 | SE_23747 | chr1:17891217-17891794 | Colon_Crypt_2 | SE_24767 | chr1:17890329-17891818 | Colon_Crypt_3 | SE_26139 | chr1:17891743-17893168 | Duodenum_Smooth_Muscle | SE_26573 | chr1:17889896-17898099 | Esophagus | SE_31687 | chr1:17890278-17892487 | Gastric | SE_34117 | chr1:17890518-17891819 | HCC1954 | SE_40808 | chr1:17889889-17894001 | Left_Ventricle | SE_43031 | chr1:17890076-17897872 | Lung | SE_46963 | chr1:17890621-17891038 | Ovary | SE_46963 | chr1:17891953-17892681 | Ovary | SE_46963 | chr1:17892689-17893219 | Ovary | SE_47562 | chr1:17890635-17891305 | Pancreas | SE_47562 | chr1:17891307-17891921 | Pancreas | SE_47562 | chr1:17891929-17892571 | Pancreas | SE_50079 | chr1:17890152-17892462 | Sigmoid_Colon | SE_52601 | chr1:17890706-17892409 | Small_Intestine | SE_54767 | chr1:17885171-17898261 | Stomach_Smooth_Muscle | SE_65277 | chr1:17890222-17891588 | Pancreatic_islets | SE_65277 | chr1:17891654-17892888 | Pancreatic_islets | SE_68684 | chr1:17890304-17893069 | H9 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I017566 | chr1 | 17892690 | 17893219 | GH01I017564 | chr1 | 17890529 | 17892478 |
|
Enhancer Sequence | GCCAGCCCCA AGGAGGCCCT TCCAGGCTTG GTCTGACATC ATCGTTATCC TCAGCCACAG 60 AGCGGGAGGG TGCTGGCTCT GGCACAGCTG GCACATAGTG CTTGCTCTGG CCTGCACAGT 120 GGGGCCCGTG TCTCAGGTCA CCCCTGCCTG GGTGCATCTC CAGGGTGGTG GCTAGATGGC 180 CTGGGTGAAT CCCAGGTGTT CACGGGGACA TGTGCCTGCC CTCAGCCCCC AGGTGGTTCT 240 GGACCAGAAT GCCCAGGAGC TTAGGGCTGG GACCCAGAGA GACTTGGAGG GGGGCTGCTT 300 TGAGAGGCTC TGTTAGGGGC AGTGCCGCTG CAACACTTCA GGGGGGCCAC TGGTCTTGGG 360 CACTTGATCT GAGTCCCCCA AGTTCTCCTC CTGATGTGCT GTCCCACTGG GGCCCTGTCC 420 TACTTGCTCC CATGGGTGGA GGCTTCATGG TCCCACCTGA GTGTACCCCA GCAGCACAGG 480 AGCCCAGCTG ACTGGTGGCT GGCTCGTGGC TGAGGTTTTA ACCTGTAAAT ACTGTAGGGG 540 CTCAAGACAC AGGCTCTGCA GCCACGTGGC CTGGGTTCAA AGGCCAGCGC TCTCATTTAT 600 TGACTATGTG ACCTCGAGCA ATTTTCTGAA CCTCTCTATG CCTCTATTTC CTAACCTGTA 660 AAAGGGAATG AGAGTGGCCC CTGTCTCAGA GGGTTTTTAG GAGGAAATTA TAGGAGCTGT 720 AGGAGTAAAG GGCTTGGATT AGCACTGGGC CCTTAGCACG CAGTTAACAC GTGTTCGGTG 780 TCTGATGTTG ATTTTGGCAC TGACATTGGG CAACCCAAGG AGCCACTGCA TTTCTGCTGT 840 GCCCTGTGGC TGGCACCTGG ATTCCACTTC CTCAGTAATG CTTGTCATGA ATGGGCCAGG 900 TCAGCAGGGA CAAGAAGAGC AAAGGCAGCA CCCGGGCACT TCACTCCCAC CCAAGGCCCC 960 ATTCGGGCAG CTGTAACGAA ATGCCGTGAC TCTTACCAGC AACAGGCAGT TATTTCTCAA 1020 AGTTCTGAAG GCTGGAAGCC CATGATCAAG GCAACAGCAG ATTCGGTGTC TGGTGAGGGC 1080 CTGTTCCTTA TAGATGGTAC CTTCTCACTG TGTCCCTGCG TGGTGGGAGG GCCTAGCCGG 1140 GGCCTTGTTT ACAAGGATAC TAATCCCATT CACGAGGGCT CTACCCTCAT GACCTGATTA 1200 CCTCCCCAAA GCCCCACTGC CTAATCCATC ACCTTGGGGG TGAGGTTTCC GCATAGGAAT 1260 TTTAGGGGGA TAAAAACATG CAAATACTGT GGGGCTCAAG GCACAGGCCC TGGAAGCCCT 1320 CATTTCTACC TTCTTCCCTT CTCCCTCCTG CTTAACATTT GCTCCTTGCT GCTGCATCCC 1380 AGGCATTGCA GACGAACTAT CCATGCTTTT GGTCACCCTT TCAAGGAGCA CTAACTGGTG 1440 GACGGCCCCC CTCCAACTCC TCATTGCCTG AATCTAGGCT CAAGTCTGCT CTCAGGAGTT 1500 TCTGCAGCCC CCAGGTCTCC CGAAGGGAAG CCCAGCTGCT ATTGTCAACA CTGTTCAGTT 1560 CTCCTTCCCC TTCTGGACCG CCAGTGGCTG TGTCTTTCTC ACCACAGCAG GGGATACTTG 1620 ATGAATATGC ATAGAGGGTT GAGCCATGCG CTAGGCTCCG GGACACAGGG CAGGAGGGTG 1680 CAGCTCCTGG CCTCGGAGAG CTCGGCAGTC TGGTTGTTTA TTTACTAACT CGGGTACCAG 1740 GACCGTGGCT GGGCACTGAG GACATGGAGA GGCAAAAGAT GCAGTCCCAC CTTAAAGAGG 1800 CGGCTGTACA TATTCCCCCT CCCTCCCTGG CTGCCTCCTC TCCCCACCTC CTGTATTGCG 1860 GATGCTGGGC CAGGTGGTGC AGATACAGAC ACAAGTAGGT CGTGGTCTCT GCCCCCACAG 1920 TCTAGCGGGG AGAGGCACAA AAACAAGTAC TGTAGCAGAA TGCAGTTTCT TTAGATACTT 1980 GTAGCCTGGT GTTTGTCTGC CATGGAAACC AGTGGCAATG GCTTTGGTCT TTGTATTCCT 2040 GTGACTAGTA ATGGTGACAC AACCCTGCAT TAACAGGCCA GCGTCTGCTA TAGATCCCCA 2100 GAGGACTTCA CCAATGCCCT CTGATCCGGG TTTCCCAACC TCGATCCATT GACATTTGGG 2160 CTGGATCATT CTTTGTGTTG GGGCTGTCCT GTGCCCTAAA GGATGTTTAG CGGCTTCCCT 2220 GGCTTCCACC CACCAGATGC CAGTAGTGTC CCCCCTCCCC ACCTAGTGTG GCAACCAAAG 2280 TGTCTACTGC CATTGCCAAA TGTCCCTTGG GGGACACAAC AGCCCCTGGT TGAGAACCAT 2340 GGCCTCCCAT AGATCTGTAA AGCTGTAACT ATAAATCAAG GTGGGATGGA AATTTTGAAA 2400
|