EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-00419

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:10782680-10783470

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:10783241-10783261

GGATGGTGGGTGGGTAGGGG

6.56

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_24724	chr1:10782796-10784169	Colon_Crypt_3
SE_26723	chr1:10782546-10784344	Esophagus
SE_31374	chr1:10781495-10788546	Gastric
SE_40607	chr1:10772324-10790002	Left_Ventricle
SE_41555	chr1:10781532-10785534	LNCaP
SE_42099	chr1:10779231-10788633	Lung
SE_48119	chr1:10782759-10788636	Psoas_Muscle
SE_48591	chr1:10773352-10788686	Right_Atrium
SE_49447	chr1:10781476-10784257	Right_Ventricle
SE_54510	chr1:10783384-10788141	Stomach_Smooth_Muscle
SE_65281	chr1:10783274-10785800	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I010722

chr1

10782912

10789847

Enhancer Sequence

GGGGGGCAGC TAAGAGGCAG GTATCCAGTG AGCACCAATT CGGACTGGCC CAGGGCTCCA 60
TGTCTGCCCC CAGCAGAGCC GTGGTGGTGG CTGAAGGTGG TCCCATCTCA CTCGACTTCC 120
ATTTCAAACA TCCCTGTCTC CTGCCCCAGC CCAGCTGCCT CCCTCTGGCA TTACTGCCAC 180
AGGCCTCTAG GAAGAGCTGG CGCCAGGGCT GCATGGGGCA GACACTCTCC CCCCCAAAAA 240
GGCCTGCCCC CGCACCCCAG AAACAGGCCC AACAGGATGC CATCCGGGGG AGCTTGGAAG 300
CCTTCCGGGA AGAGCACTGC CCTGGCACCA GTCCTGCGGG AAGGAGGTGA GCCGGGTCTG 360
CCACTGTCTG CGCTCACCTG ATGTGCGCCC ACGGCAGCTG AGCACCAATG GGGTGTGCGT 420
GGGTGCAGAC GGGAGGTGCG CATCATGGCG CCAGGAGCCA GAGGAGGAAG GGCAAGTGGC 480
TGGGAGTGGC AGCAGGCTGG CTGGTCACTG AACAGTGCCC TGGCTGTAAA CCGGACGTGG 540
GAAGGCCCCG CCTGCCAGTG TGGATGGTGG GTGGGTAGGG GGACAAGAGG AAGGGTTTCA 600
TCTGAACACC CAGCCAGAGG GGCCCACCTC CCCCTGGCCT GTCCATCACC ACTGCACAGT 660
GAGTGGGGGC AGGCCTTGCT TCTACTTCAC TTGTGCCCAT ACCACAGTCA CTCACAGATA 720
CAGCCTCCTA GGGGGCTCTG GGGTGTGGGG GCTCTCACTG TGCCATGATT TAGAGCCCCT 780
TTAAAACCAA 790