EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-00143

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:3397800-3399580

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:3398855-3398875	TGTGTGCGTGTGTGTTGGGG	-	6.63
Zfx	MA0146.2	chr1:3399277-3399291	CAGGCCTGGGCTGC	-	6.2

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_24148	chr1:3398295-3398879	Colon_Crypt_2
SE_25201	chr1:3398200-3400613	Colon_Crypt_3
SE_32132	chr1:3397721-3400716	Gastric
SE_68941	chr1:3398241-3400915	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I003479

chr1

3395767

3400171

Enhancer Sequence

CCGTGTCATG TGTGGTCGCC CCAAGCTCGC CCCTGGTGTG GCCAGTCTGC CCACCGGCTG 60
GAGCACTGGA GCAGGGCCAG CGGCCCCTGA TCGTGTACTG AGAAGCCAGG GGCGGCACAG 120
CTGCGCCTTG CAGGGCCCAG GCTGGCCAGT GGTTTAGAGG ACTCCGGGAT TCAGTAGAGC 180
TTTTGGGGAT CCCTCTGCAG TGTCCCCAGG GTTGGAGACA GGCCCCACCT CCCTCCCAGT 240
TTTTCCTCCC AGCCATCTCG TCCTGGGAGC TGCAGGCAGA AGAGGCAGTC CCTGAGCCAG 300
TCGGCTGACC TGGGGTGGCA CAGCAAGAGG AGGACTGGTC CTCTCTGTCC CAGGAAGCCC 360
CCACCAGCCC TCCTGTGTCC GACGCCAATG CCCGTTGCCT TTGTGGGCTT GGGTAATGCT 420
GTCCTCAGGG AGGGAGCACC CAGCATACAC CTGAGAATCT GCCCTGATCC TCCTGGGTCT 480
GGGGCCCTGG CTTCTGCAGG AAAGTCAGGG GTGCATCTAC CCCATATGCC AACCAGAAAT 540
GGTGATAGGA GACTGCCCTC CACCCCTCCC AGGCTTGGGG CAGCTGCAGG ACCTGGTGCA 600
TGAGAGGTGG GGTGGGCTGA AAGAACACGC TGCTCCCAGC CCCCGCCTGC TGGACCAGGG 660
CTTAGGGGAG GAGGCGAGGT CTGGAGGGCC GTGCAGTGCG AGGAGGGCCA GCTCCTCTCC 720
CGGTCACCTC CATGGCCTTG GGCAGCAGCA ATGGCCCAGT CCAGGCTCGG AGCCCACGCA 780
GGACTGTCCT GGGCAGGGCT TTGGTCAGCG GCCGCCTCGC AGGGCGGGGC ACAGCCAGGG 840
CTCTGGGAAA GAGGAGGCAC CTGGGAGCAG AATCCCCTGA GATGGGGCCA GCTCCTCCAC 900
GCCCAGCGTG GCATCTCCAG CCTCCGCTGT CCTGCCTGTG AACTGGTTAC TCCCTGGGCT 960
TTTCCTGGAG CTCCTGTGGG AGCAAACTGG CAGCCAGGGC AGGGCATGTG TGTTGGCAGG 1020
TGGTGTGTGC ATGTGTGCTA GCATGCCTGT CTCTGTGTGT GCGTGTGTGT TGGGGGGCGG 1080
GGGGGCGGGT AGCCAGGGGG CAGCAGTTTC GTGTAAACCC AGCTGCCCTG CAGCCTCCGG 1140
GCGGTTCTCA CTGCCAAGTT CATGCTCAGC TCACGGAGCA AGGCGGATCT GGAAAGCCTG 1200
GCCTCTGACT CTGTGACCTC ACTCTCACGT ATGTGACCTG GGGCAGGTGA CTCAGCCTCT 1260
GCGCCTCAGT TCCGTCTGCA AGTGGCTACA GCAGCCTCTG CGTTTTAGCG GGCAGTGAGA 1320
ATGCTCAGCC TGCAGGGAGG GGGTCCGGGC CCAGGCTGGG TGGCTGTCCT GCTATGGCAG 1380
TGGCCAGGCT GTTGTTGGGG GCATCTGGGG CAACCTGGGG AGGGCCCAGT TCAGGCCTGC 1440
TCAGGACGAG AGCCCCTCCC GGCAGAGTCA GGAAGCGCAG GCCTGGGCTG CCAGTGAGGT 1500
GTGGGCCCAG GCAGGGGCGA GACCTATGGG CAGGAGGGGC GTCAGGAGAG GGGGCCACAG 1560
GCTTGTGTAG CCCCGTCCCC AGCACCAGTG CCAGCTCACG CCCGTCCGAG GGCCCCTGCT 1620
CAGCCTGGGG TGCCGCCTTC ACTGGCCCAG GTGCTATGGC CCCCTCAGCA GGACAGAGCC 1680
AGCCTGGACC CCCAGGACGA TCACCCCCTC CCCGGGGTCT TCTTGCTCAC TCTCCTCATG 1740
GAACCTCAGC CTGTCCCGTA CTTCCAGTGT TGGGGTCCAG 1780