Tag | Content |
---|
EnhancerAtlas ID | HS038-19289 |
Organism | Homo sapiens |
Tissue/cell | ESC_neuron |
Coordinate | chr6:148829410-148831610 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFYA | MA0060.3 | chr6:148830352-148830363 | TCTGATTGGCT | - | 6.32 | RFX1 | MA0509.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.33 | RFX1 | MA0509.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.3 | RFX2 | MA0600.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.76 | RFX2 | MA0600.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.78 | RFX5 | MA0510.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.78 | RFX5 | MA0510.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.88 |
|
| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_00189 | chr6:148827351-148833077 | Adipose_Nuclei | SE_02400 | chr6:148828643-148831690 | Astrocytes | SE_03233 | chr6:148828664-148831578 | Brain_Angular_Gyrus | SE_04018 | chr6:148827701-148831786 | Brain_Anterior_Caudate | SE_04985 | chr6:148827628-148833079 | Brain_Cingulate_Gyrus | SE_06000 | chr6:148827366-148831776 | Brain_Hippocampus_Middle | SE_06894 | chr6:148827671-148832923 | Brain_Hippocampus_Middle_150 | SE_07883 | chr6:148827633-148832017 | Brain_Inferior_Temporal_Lobe | SE_08885 | chr6:148829946-148831197 | Brain_Mid_Frontal_Lobe | SE_26315 | chr6:148827595-148831798 | Duodenum_Smooth_Muscle | SE_29728 | chr6:148827825-148833246 | Fetal_Muscle | SE_37474 | chr6:148828460-148832072 | HSMMtube | SE_38980 | chr6:148828338-148831308 | IMR90 | SE_44188 | chr6:148827585-148833149 | NHDF-Ad | SE_44870 | chr6:148828547-148832073 | NHLF | SE_45588 | chr6:148827694-148833266 | Osteoblasts | SE_55824 | chr6:148828748-148832801 | u87 | SE_63863 | chr6:148828930-148831799 | HSMM | SE_67837 | chr6:148828748-148832801 | u87 | SE_68262 | chr6:148812529-148851977 | TC32 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr6 | 148829449 | 148830800 | chr6 | 148830800 | 148831449 |
|
Enhancer Sequence | ATTGGAAGGT GTCTATTTTC AATTGAGACT GCTCCCTTAA GGGGGTGTTC AGAAGAATGT 60 CTGAAAAAGA GATCTTTTTT TAAGTTCAGT CACTTTTAAG GGTTAGTCCT TGTCCTCCTT 120 GTCCTGGATT TGCTCAGATT CTCGCGTTCT TTTTTCTGTC TCTGGAATTC CATAGACAGT 180 AATTAAGGAA CTGGAGGCCA GCAGGAGGTC AGGGAGCCTT CCTCAGTGAA AACAGGGATT 240 GTTGGCCATG CACAACACTC CCTTTTTTCC TTGTGGTGAA TAGGAGATTT GCTTAGAGCT 300 GATGACTTAT GCCTTTCTTG CGAGTTATGC AGTTAGCAAG CGACTGGGGA ATCAGTCAGC 360 AAGCAGAAAG AAGCTAATTG AATCCAGTGT CTTCCCCTTT CTCCTTCGGA TACTGAGCTG 420 TGACGGTGGA GCCTGCCTGA TCATGTAACT CCAGAGAGAC ATGTTCCAGG AGTGCCTAAT 480 CTTAATTTTG AGATTGCGGA GTTTGATGCT ACAAGAGTGA AGACGCTCTC CGAGTGGGGA 540 GGGGGGTGGG AGGTACAGGA CGTCTTCAGA ATTACCCCTT AGGCTTGCTA AATGCCGAAG 600 CCGGTAAGTC ACTGAATGCG TTCAATGGGA AAGAAAGAAT GTGTTTTCTG TTGCTTCAAG 660 TAAAAGTTTT TGCTGCTCCT GCCTATGATG TTTCTCTCTC TTTTCTTCTT AAATTCCTCT 720 AGATTTGTCC TTCTTCGCCT GTTTACTTCC CTACCTGGTA ACCCTGAGCA TTTTTGCCTG 780 GCATTTTCAC CAGTGAAAAT GCGTAACTTT TAGAGAATAG TGAGTATTGT TTTGAGAATT 840 TGAGACAATG AGCATATATG GCTCAGCTGT GAATTGTGGA GGCTTTTCCT GGGGAGGACT 900 TGAATTCAGA CAGTGTTGCA CATTGCTTTT CATAAGCTTA TATCTGATTG GCTTCCTTCT 960 CTTAAGTTTA AGATTAACGC TGTGACACAG CCGACCTAGA AAGCTGAAGT ATGTATGTCT 1020 AATCATGCGC TAGGTTAGAG AGACCAGTGT GTGAATTTCA CAGGCAAGTA CATTTCCAGT 1080 TTCAAATTGC TTTTCAGAAA TGTTTAAATA TCTCTCGGTG TTACGTGGCG CTGGGGGAGA 1140 TGAGTGGGCT TAGTCTGGGT GTTAATTGTG ACAGCGTGTC GTGTGTTTCG AGCTAGGGAA 1200 ACAAGCTGAG TGAAAGTGCT TCTGCAGAGG GCACAGTTGT AATCCTGTGA TCAGCGTGGT 1260 GGTCTCAAGC GGTCCTCCAA AGGGTCTAGT TGCTCCTTGC AAATTGGTTT TAACCTTTAT 1320 TACAGCATAT TGCCATTGTG CTTGCACAAC TGTGCCATAT GGCTTTTGGA AAGGATTTGT 1380 TCTGCACACT GCAGTCCCAA GAACTGTTTG TTACAGGGTC CGGTGAAGTA TCTGTTACCG 1440 ACCAGCAGTG ACAGGTTTAC TTGGAGCAGG GAGAGGATGC ATTTAGTGAG CTCCGGCACA 1500 CAAATGTTTG TACTCACAGA TGCTATTCAT TTTGTTCCTT TTTTCTGATC ATCCAGCGTG 1560 TAGCTGTGTT ATAAAAAGTT CTCCACGCTG GCTCCATGTC TTTCCTATTA GAACATTGCA 1620 GATGTGTCAA GGATGCACTT GTTCCAAAAG AAGCTGGGAA GGAAGGAGGC TCCACCCTCC 1680 TCCGGGTGCC AGACGGGCCC CATAGGTTCC TCATTCAGTG GCCTGGCCGG CAAATGGTGT 1740 GCTATCTCTT TAAAGCAGCT ATAGTTTTGT GTCTTGGCTT GGTCAATTTG TTATGGTTTA 1800 AAACTGTGGA GCCAGCTGTC TGCAATCTGA TGTAATGTTG CTATGGAAAC CAGAAATGAA 1860 ACACTTAAGC ATTCACCACA GAATTACTAC ATATAGCATT AGCCAAAGTA ATTAAAAGTT 1920 GAGCCATATG GGCTTTCTGC TGGAAAAAAA TCTGCAGAGG AGAGGCTGGA AATCAAATGT 1980 TTCTGTTTAC AATATTGGAA ATCCACTTTT CCACAATTTT TGGTGGGATA AGTTGCCTTT 2040 TTCTCTTGAA GGTTTTCTGG TGAGGAGCTG TCATACAGAT GATTGAGTTC ACCTTCTCAC 2100 TGAGAAGATG ATCTGTTTAA CTCTGACCCA GGGTGGGACA AGGGAGGGGA GGCCACACTA 2160 TCTCATGTTT GAATGTGTGT GAATATATAC TTTTATTTTT 2200
|