Tag | Content |
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EnhancerAtlas ID | HS038-18475 |
Organism | Homo sapiens |
Tissue/cell | ESC_neuron |
Coordinate | chr6:33538480-33540000 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Gata1 | MA0035.3 | chr6:33539397-33539408 | TCCTTATCTGT | + | 6.14 | Myod1 | MA0499.1 | chr6:33538697-33538710 | GGTGACAGCTGCA | - | 6.5 | NR3C1 | MA0113.3 | chr6:33539915-33539932 | TGGGACATTGTGTCCCA | + | 6.08 | NR3C1 | MA0113.3 | chr6:33539915-33539932 | TGGGACATTGTGTCCCA | - | 6.25 | NR3C2 | MA0727.1 | chr6:33539915-33539932 | TGGGACATTGTGTCCCA | + | 6.17 | NR3C2 | MA0727.1 | chr6:33539915-33539932 | TGGGACATTGTGTCCCA | - | 6.63 | YY1 | MA0095.2 | chr6:33539199-33539211 | GCGGCCATCTTG | - | 6.62 |
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| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_10724 | chr6:33537553-33540480 | CD19_Primary | SE_12367 | chr6:33537599-33540406 | CD3 | SE_15122 | chr6:33537647-33541226 | CD4_Memory_Primary_7pool | SE_15643 | chr6:33537713-33540264 | CD4_Memory_Primary_8pool | SE_16059 | chr6:33537640-33540103 | CD4_Naive_Primary_7pool | SE_16811 | chr6:33537720-33540262 | CD4_Naive_Primary_8pool | SE_17741 | chr6:33536568-33541584 | CD4p_CD25-_CD45RAp_Naive | SE_18195 | chr6:33536568-33541740 | CD4p_CD25-_CD45ROp_Memory | SE_19684 | chr6:33537966-33540911 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21876 | chr6:33537838-33540167 | CD8_Naive_7pool | SE_22263 | chr6:33537639-33540503 | CD8_Naive_8pool | SE_23054 | chr6:33537548-33541008 | CD8_primiary | SE_23452 | chr6:33538536-33539961 | Colon_Crypt_1 | SE_24002 | chr6:33538588-33539841 | Colon_Crypt_2 | SE_50523 | chr6:33538390-33540761 | Sigmoid_Colon |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr6 | 33539800 | 33539903 | chr6 | 33538911 | 33539356 |
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| Number: 1 | ID | Chromosome | Start | End |
GH06I033569 | chr6 | 33537687 | 33540496 |
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Enhancer Sequence | ATAACTTGTT CAATATACTG AGTGATTTTA GGCTAAGGAA GGATTTTTTC AAATGAAAGG 60 GTTTGGATGG ACACTCGGTG ACTCTCTAAA ATATACTCTT CAGAGGAGGT AAAAATAAAT 120 ACGTGAAGGT AAAACGGCAG GGTGGGGGTG GGGAGAATGT GAGGCTGTTG TGTGCAAGGA 180 AGGGCGGGTA TTCATACTGA AACTGCAGAA CTAAGCAGGT GACAGCTGCA CACCGCTCCT 240 TTCCCTGGCC GGGCTGCCCC AGCTCAGTGA CATCACAGAC TGTGACGAAC CCAGACGTAT 300 TTGGTGGAAA CCAAGCCACA ATCTCAGAAG CAGCGCACAG TTTGAGTAGA AATGAGTTTT 360 TTTGGTTTCT CTTCCCTAAT ACCCACAGAG CCCCTACACT CCCGTTATCC TCGCAGCCCC 420 TGGCTGACTG TGTCCGACCT AACTTCTCGC CCCCTGGTTT CAGAATATCC TGGCAGCGGA 480 ATAGAGGGCG TTGGGGGGCG GTGCAGGCCA AAACTTTTTG GGCTGCCCCA CCCATGCCTT 540 TCCGGTTAGC GTTGCAGCTC CTTAGACGAG TAGGCTAACC ACAGCCCACC CGCCTTTCTT 600 CCAGCGATGC AACGATCTGT TCGCCGCTCA ATGCCGCATG CTGTTCAAAG CCCAGAGGCT 660 GGAGTGGGTG CGCCCCAAAG GCCCCGCCCA AGGAAGGGCA CGCTTGCGTG CTCGCGGCGG 720 CGGCCATCTT GGACTCGGGC AGCCGCCCAC TTCTAACCTC TATGGCATCG CTCCGGGAGG 780 GAGGCGACCC CGCACTCTGG GCCTCTTAAA CCTGTGCTCG CGAGCCCCAC ATTGCTCTCC 840 GGCCTCCACG TAAAACTCGA GCCAGTTTCC TGGTGGCAAG TCCTCACTCC TTGGGTGACT 900 CTGAGAAAGC ACCCGTTTCC TTATCTGTAA ATAGTAGTTT GAGTACCCCC ACCCCCGTCT 960 CCTACCTATT ATTTGGGCAG ATGATGAACT CTCAGCATAA AGCCTGGCAC ACAGTATGTG 1020 TTCTATAAAT GTTGTCTGTG AGCTTTTCCT GTACACTGCG GGGTGCCTTG TAGCAACCAC 1080 CTTCCAGCCA CCACTGCCTG CAGCGCCGCC TTTTCCCTTT TCCAAGATCG CGTCTGTACT 1140 AGACTCTGAA GACCTTGTGG AGGGAAAAGG GGCTTGGCAA GCCCACCCCA GGAGGGTGAA 1200 GGTGAAACTC ACGAGTTCTC TTGGACTTGC ATGTGACCCT TTTGGAAGGG CGTCAGAAAC 1260 ACAGACCAGG GTGCCCAGGA CTGGAAAGAC TGTAGATTTT GGAACATTTA AACGCCCCCA 1320 TGCTTGTTAT TTTTATCACC CCTGGCTGGG TACCCATAGG GACTCCCAAG CAGCATAAAA 1380 CTAGAATGAA AGCCCTGCGT GTGTGCTGAC TGTGGAGACA TCAGGAAGGG GGAGCTGGGA 1440 CATTGTGTCC CAGGCAGAGC TAAATGTGGG GGAGAAGGGC CTTTTGGACC AGCGTGGGTG 1500 GTAGCCCCAG GGTGGGAGAA 1520
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