EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-11144

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr2:47570930-47572030

Target genes

Number: 12
Name	Ensembl ID

TTC7A	ENSG00000068724
MCFD2	ENSG00000180398
CALM2	ENSG00000143933
BCYRN1	ENSG00000236824
AC073283.4	ENSG00000234690
EPCAM	ENSG00000119888
MSH2	ENSG00000095002
AC138655.6	ENSG00000236558
KCNK12	ENSG00000184261
AC079250.1	ENSG00000230979
AC006509.6	ENSG00000225009
AC006509.7	ENSG00000224058

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_04034	chr2:47571871-47573447	Brain_Anterior_Caudate
SE_04923	chr2:47570099-47571143	Brain_Cingulate_Gyrus
SE_04923	chr2:47571257-47573593	Brain_Cingulate_Gyrus
SE_06205	chr2:47571262-47573563	Brain_Hippocampus_Middle
SE_06891	chr2:47571097-47573642	Brain_Hippocampus_Middle_150
SE_07961	chr2:47571475-47573457	Brain_Inferior_Temporal_Lobe
SE_23147	chr2:47570136-47571062	Colon_Crypt_1
SE_23147	chr2:47571143-47571650	Colon_Crypt_1
SE_23147	chr2:47571740-47572295	Colon_Crypt_1
SE_24789	chr2:47571242-47571675	Colon_Crypt_3
SE_27702	chr2:47569473-47574751	Fetal_Intestine
SE_28615	chr2:47569379-47574795	Fetal_Intestine_Large
SE_50655	chr2:47571247-47574617	Sigmoid_Colon
SE_52751	chr2:47569558-47571234	Small_Intestine
SE_52751	chr2:47571253-47573475	Small_Intestine

Enhancer Sequence

GCCTGTAATC CCAGCACTTT TGGAGGCTGA GGTGGACGAA TCACCTGAGG TCAGGAGTTT 60
GAAACCAGCC TGGCCATCAT GGTGAAACCT CGTCTCTACT AACAGCACAA AAATTAGCTG 120
GGCATGGTGG TGCGTGCCTG TAATCCCAGC TACTTGGGAG GCTGAGGCAG GAGAATTGCT 180
TGAACCAGGA GGCGGAGGTT GCAGTGAGCC AAGATCACGC CACTGCATGC CAGCCTGGGT 240
GACAGAGCAA GACTCTGTCT CGGGAAAAAA AAAAAAAAAA AACTATATAT ACATACATAC 300
ATATATATAT ATATATATAT AAAATGTACA TATATATTTA TCTGGCACCT ACTAGATGCC 360
CCAGGTACCA TGGTAGGCAC AGGTGTACAG TGATGAAGAG CATTTTCCTA TAAAATATTA 420
CCCAGGCTGA CTCCAAGTTT TAATACCTCA GGTAGGAAAA GGAGGAGAGT GTTAGTAAAA 480
TGTTTGCCGT TGAATTTCAC CAGCGTAAAA ACAACATTCT GGGAAATAAT TATCTGCACT 540
TCAGTTCTTT GGGGTGGTAC CGGAGGGAAT CTTTACAAAG GTGGTATTAA TGGAGAAGAG 600
GAAGGGAAGG ATCCTTAGTG ATGGGTTGTT TTTCCAAGCA CCTCGATCTA GTGGATTTCC 660
TTTTTTTTTT TTTGAGATGG AGTTTCGTTT TTGTCGCCCA GGCTGGAGTG CAATGGCGCG 720
ATCTCGGCCC ACTGCAACCT CCGCCTCCCA GGTTCAGGCG ATTCTCCAGC CTCAGCCTCC 780
GGAGTAGCTG GGATTACAGG CACTCACCAC CACGCCCAGC TAATTTTTGT ATTTTTAGTA 840
GAGACGGGGT TTTGCCATGT TGGCCAGGCT GGTCTCAAAC TGATCCGCCC ACATTGGCCT 900
CCCAAAGTGC TGGGATTATA GGTATGAGCC ACCACGCCCA GCCAGTATTT CCTATAAATA 960
AATGCTCCTA TAAATAAATA GTACAAATAC CTTTCCAAAT CTGAGAACTA CTAGTGAGCA 1020
TCAGTTTTAG AGATAAATAG AACAAAGCTC CTTTTCTGCA GTAAGAATAT ATTAGCTTAA 1080
TGTTGCTTTT TAAAAAAGTT 1100