EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-08260

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr16:74400660-74401960

Target genes

Number: 9
Name	Ensembl ID

AC009120.8	ENSG00000260471
PSMD7	ENSG00000103035
AC009120.5	ENSG00000260884
AC009120.3	ENSG00000239763
AC009120.6	ENSG00000259972
RP11	ENSG00000214331
NPIPL2	ENSG00000196436
CLEC18B	ENSG00000140839
RFWD3	ENSG00000168411

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr16:74401255-74401276	AAAAAGAAAAAAAAAGAAAAA	-	6.07
Znf423	MA0116.1	chr16:74401887-74401902	GGAACCCAGGGGTCC	+	6.84

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_18786	chr16:74395154-74405370	CD4p_CD25-_Il17-_PMAstim_Th
SE_19253	chr16:74399950-74404218	CD4p_CD25-_Il17p_PMAstim_Th17

Enhancer Sequence

AGACTGCAGC TGGCTCTACT CAGATCTGCT TATTCCAACA AGACCAAGGT GCTAGTTCTA 60
ACTTCGAGTA GTCCCTCTGT ATGGCTGCAG CGTTGCGCAC AGTGGACTGC CGGTCACAAG 120
GAAGACTGGA TGAGCGTGGG TTCACACATT TCCCACACTT GCCTCAGCAA AAGAACCACC 180
TGGGACACTT GTTTAAAAAT GACAGATTCC CACGGTCCAC CTCGGCAGAT TCTGATCCTG 240
CCACGCCAGG GAGCTGTATT TTTCAACAAG TACACCAGGT GATCACGCAA GTTTAAGAAA 300
TTAGCACAAG TTGGCCGGGC GCAGTGGCTC ACGCCTGTAA TCCCAGCACT TTGGGAGGCT 360
GAGGCGGGCG AATCACGAGG TCAGGAGTTC CAGACCAGCC TGGCCAACAT AGTGAAACCC 420
CGTCTCTACT AAAAACACAA AAATTAGCCG GGCGTGGTGG CGCACACCTG TATTCCCAGC 480
TACTTGGGAG GCTGAGGCAG GAGAATTGCT TGAACCCAGG AGGCAGAGGT TGCAGTGAGC 540
CGAGATCGCG CCACTGCACT CCCGCCTGGG CGACAGAGTG AGACTCCGTC TCGGAAAAAA 600
GAAAAAAAAA GAAAAAAGAA AAAAGAAATT AACACAAGTC CCTGCCACTG GAAACGCATA 660
TCCGTTGGGC TGGCTCCTCC TCCACCACCA GCCCCCATCC CGGTACATCA CGTTTACATG 720
CATGCGGAAA ATGGGCTTGG AGATTCTTGA TTCAAATCCG AGGTATCACA CATCGGCCCC 780
CAAAGGTCAA ACATTAAGAA GGAAGCTTAC TGCCCTGTCC CAGACTTTTC TAGGTGACTT 840
CTTCCTCCGG ACTCTGCAGC AGTCTTACTA GTTCTGAAAG CACAAGCGGA CCGCACGTCT 900
CAACGCGGGA AAACAGTTCC ATCTGCAGGG ATGGAGGACC GGGCTAGACA AGCTGGAGTT 960
GGCTCTGCGC CGCAGGGGTG TGCAAGCCCA AGACTGGGGA GCCCGAGGTC ACCCCGGCCG 1020
CCCTGGCATC GGGGCTGAGG TGCAGGCTCC TGGAGGAGCG GTGCGCAGGC CCAGGGGTAG 1080
CCGAGGACAC AAGCCAAGGC ACGAGCGGAC AACCTTACGG GGACGAGTAC TACCGCCCGG 1140
ACGCGACTTC GCGAGAGGCC AGGCGGAACC CACTGGAAGC GTGAGCTAGC GGGGACCACC 1200
CCCGGGCGAA ACCAAAGGAG AAAGAGGGGA ACCCAGGGGT CCCGGGGCGC TTAGGCCCGC 1260
GCGGACGGGG AGGCCAGAGT TGCCCCGAAG CTATCTCCTT 1300