EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-04785

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr12:56841670-56843090

Target genes

Number: 28
Name	Ensembl ID

SARNP	ENSG00000205323
DNAJC14	ENSG00000135392
WIBG	ENSG00000170473
AC034102.1	ENSG00000255990
SUOX	ENSG00000139531
IKZF4	ENSG00000123411
RPS26	ENSG00000197728
ERBB3	ENSG00000065361
PA2G4	ENSG00000170515
RP11	ENSG00000257553
RPL41	ENSG00000229117
ZC3H10	ENSG00000135482
ESYT1	ENSG00000139641
MYL6B	ENSG00000196465
MYL6	ENSG00000092841
SMARCC2	ENSG00000139613
RNF41	ENSG00000181852
OBFC2B	ENSG00000139579
ANKRD52	ENSG00000139645
COQ10A	ENSG00000135469
TIMELESS	ENSG00000111602
SPRYD4	ENSG00000176422
MIP	ENSG00000135517
GLS2	ENSG00000135423
ATP5B	ENSG00000110955
PTGES3	ENSG00000110958
NACA	ENSG00000196531
PRIM1	ENSG00000198056

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr12:56842969-56842980	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr12:56842969-56842979	GCCCCGCCCC	+	6.02
Zfx	MA0146.2	chr12:56842270-56842284	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

GCAGAAGGAA CAGCAGGAAC TAAGTACTGA GATATGAAAG AGGGCAGCCA CAATCTTTCC 60
ACGTGGCCAG GAGTCAGGTG CGTAAGAGAT TTACAAAATG AGATTGAGAG GGTCAGGGCC 120
AGACTGAGAG GCCACAGACA CCCACCTACG GATTTAAGGC TAACTGTGGG TGGTCAAAGA 180
GGAGTTTTAA ATTTAACATC AGATGATCTA CCTTTACTTT GTACAAAGTA CTAGTAGGGC 240
CGGGTGTGGT GGCTCACACC CGTAATCCCA GCACTGTGGG AGGCCGACGC GGGCGGATCA 300
TTTGAGGTCA GGAGTTCGAG ACCGGCCTGG CCAACATGGT GAAACCCCAT CTCTACTAAA 360
AATACAAAAA TTAGCCGGGC GTGGTGGCGG GCAGCTGTAA TCCCAGCTCC TGGGGAGGCT 420
GAGGCAGGAG AATCGCTTGA ACTGGGGAGG CGGAGGTTGC AGTGAGCCGA GATCGGACCA 480
CTGCACTCCA GCCTGGGCGA CAGAGCCAGA CTCCATCTCA AAAACAAAAC AAAACAAAAC 540
AACCAAAAAA AACAAACAGG CCAGGCGCGG TGGCTCACGC CTATAATCCC AGCACTTTGG 600
GAGGCCGAGG CGGGCGGATC ACGAAGTCAG GAGTTTGAGA TCATCCTGAC CAATAAGGTG 660
AAACCCCCAT CTCTACTAAA AAAAATACAA AAATTAGCCG GGCATGGTGG CGCGCGCCTG 720
TAATCCCAGC TACTCAGGAA GCTGAGGCAA GAGAATCGCT TGAACCCGGG AGGCGGAGGT 780
TGCAGTGAGC CGAGATGGCG CCACTGCACT CCATCCTGGG CGACAGAACG AGACTCCGTC 840
TCAAAATAAA ATAAAATAAA TAAAAAATTG AAAGTACTAG TCGAAGCACG AATGGCAAAG 900
AATTGAGAGG CTCAAGGAAA AAAGCTTCAT TAGCGGCTGA GGTCCAGGTG ACAAACCCGA 960
ACAAGGCAAC GAAGGGAGGG AGTGAGAAAT CCGTTCCATA AAACCCACGA TATAAGTAAA 1020
GCGGCCTGTG AATTCCGACC ACTGCTGACC GCCAGGCCAC ACACCGGTTT TTTTCAGGAG 1080
GTCTCAACTA GATGCTAAGC TCCGAAGTGG AACTCCCTCA GGCACTTTCT GTTCTAATTC 1140
AGGAATTCCA AGCCCCTTTC CATCACAACC CCATCCCGCG GGAGACCCAA GCTGTGCGGA 1200
GCAGCGTAGG GCTAAGCCCG CGTCCGGTGA GACCCGGGAA CGCGGCGCGG GAGACTAAGG 1260
AGCAGAGTAC AGAATTGCGC GTGCGCGCCT GCAGCACGAG CCCCGCCCCC TGGCTCTAAA 1320
CCGGGTGGCG GGAAAAGGGA CTCAGCGTTT CCCGAGAATG CCCCCATAGC TTCGAAAGGA 1380
TCCCCGTGTC CGCTTAGCGC CCTCTCGCCA CACACTCACT 1420