EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS038-04425 
Organism
Homo sapiens 
Tissue/cell
ESC_neuron 
Coordinate
chr12:6900760-6902730 
Target genes
Number: 42             
NameEnsembl ID
RP1ENSG00000213942
LOC678655ENSG00000215039
VAMP1ENSG00000139190
NCAPD2ENSG00000010292
MRPL51ENSG00000111639
GAPDHENSG00000111640
IFFO1ENSG00000010295
NOP2ENSG00000111641
SCARNA11ENSG00000247853
CHD4ENSG00000111642
ACRBPENSG00000111644
ING4ENSG00000111653
ZNF384ENSG00000126746
PTMSENSG00000159335
MLF2ENSG00000089693
LAG3ENSG00000089692
GPR162ENSG00000250510
U47924.11ENSG00000256010
LEPREL2ENSG00000110811
GNB3ENSG00000111664
U47924.25ENSG00000237240
CDCA3ENSG00000111665
USP5ENSG00000111667
TPI1ENSG00000111669
RPL13P5ENSG00000240370
LRRC23ENSG00000010626
DSTNP2ENSG00000248593
SPSB2ENSG00000111671
ENO2ENSG00000111674
ATN1ENSG00000111676
C12orf57ENSG00000111678
SCARNA12ENSG00000238795
EMG1ENSG00000126749
PHB2ENSG00000215021
C1SENSG00000182326
LPCAT3ENSG00000111684
C1RENSG00000159403
C1RLENSG00000139178
RBP5ENSG00000139194
CLSTN3ENSG00000139182
RP11ENSG00000256967
PEX5ENSG00000139197
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr12:6901140-6901158GGGATGAGGGAAGGAGGG+6.03
ZNF263MA0528.1chr12:6901698-6901719CATCTTTCCCTCCCCTCCTCC-6.3
ZNF263MA0528.1chr12:6901701-6901722CTTTCCCTCCCCTCCTCCCTT-6.67
ZNF263MA0528.1chr12:6901141-6901162GGATGAGGGAAGGAGGGTGGG+6
Number of super-enhancer constituents: 2             
IDCoordinateTissue/cell
SE_31063chr12:6900572-6902795Fetal_Thymus
SE_55412chr12:6900603-6902501Thymus
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 4             
ChromosomeStartEnd
chr1269022146902606
chr1269013216901733
chr1269018906902092
chr1269021746902630
Enhancer Sequence
GATGGGCCGG GCGTGGTGGC CCACACCAGT AATCCCAGCC CTTTGAGAGG CCGAGGCAGG 60
AGGATGGCTT GAACCTGGGA GTTTGAGACC AGCCTGGGCA ACATGGTGAA ACCCCCATCT 120
CTACAAACCC CACAAAAGTT AGCTGGGCAT GGTAGTGTGT GCCTGTGGTT CCAGCTACTT 180
GGGAAGCTGA GGTGGGAGGA TTGCTTGAGC CTGGGAGACG GAGGCTGCAG TGAGGCCTGA 240
CTGTGCCACT GCACTCCAGC CTGGGCGAGA GTGAGGCCCT GTCTCAAAAT AACTTTGATG 300
AAGGTGGGGA ATCAGAAGTA GGTGGGCAGG GGTCTGGGTT TGCAAGGCTC TGAGTTTGAG 360
CTCTGTTCTG TACCTTTGAG GGGATGAGGG AAGGAGGGTG GGCACGGTTC CCCCGATGTG 420
GGTGTCTGAG GCGAAGAAGA GGATGGCGGA GGTTGCAGCC ACCAACCACA AGAGTTCCTT 480
AGAGGGGTCA CAGTCTCTAG GAAGTTTATA GGAAGCTAGT CAGCAGTAGA GAGGGTGAAC 540
GCGGTGGGGC ACATCCCGCG GCTGGGCTTG AGTGGGCTGC TTGGGGGTTA TGGGGAGAAG 600
ATAAAAGTGC CTGTGGGACC ACAGACTCTC GCTGTGGTGG AGCTGGGCCC TCTTACCCTC 660
CCAAGCCTCG CCCCTCATCC CATCCCTGGG GGCCAGGGGT GAGGGCGGCA GGAACCTCAA 720
GGCTCTGAGA AAGTGCGTGG TGTGTGTTGC CATTTTGGTC TCTTCTCTTT CTCAGTCTCT 780
CTTTGCCTCA CTTTGGATCT ATGCTCTGTG CATCTGTCTT GCTTCTCAGA ATTTCTTCTT 840
TTCCTCTTTT TTTGTACTAC CCTGCGCTTT GTGTGTGATT GTGGATTGTG TGTGCATAGC 900
TGTTGCTTTA ACAAGCTGCT CCAGGTCTCT CTCTCCCACA TCTTTCCCTC CCCTCCTCCC 960
TTGAGGCTCT GTGCATTCTG GGGAACTCTG TCCATTTCCC TTTGTCCATG TGTCCCTCCC 1020
ACCCTGCAGC CGGCTCCCTC ACATCCACCC TGGGCTGCAG GCGTGCTCGG CAGGCTCCCC 1080
ACAGATCAAA GCTTGTCCAG GGTCTGCATT GCTGCCAAAG GCCAGGAGGA CTGTGTACAG 1140
ACCGGAAGGA GCTAGAGCTT AGTGGCAGCC TGAGAGGGGA AGCTGAAAAA GGAGAAGAGG 1200
CAAGGGGCAT TCCAGGGGAG CCCGGGAGAG CCAGCACGGC CGCCTGGTAT ATGAGGCAAA 1260
GAGGAAGACA GACACAGACA CAGGGAGCTG CAGGCTGGGG GCATAAGCTG GGGGCTGGGA 1320
AGCATAGATA CAGAAATGCA CAGATGTGAG CTGAGAAGCA AGGAGGGAGA GAGAGAGACA 1380
GAAAGAGAGA GAGAGACGTG CCAGGGCTTG AGGGACCAGA GAGCCCTCCC AGCCTCTCTC 1440
GGAGTGCTGG TATACAGGAT GCTACCGTAC TAGGGTAAGA CACCTCTGGG GGCGCTGAGT 1500
ATGGGAATCA AAGGCCAGAT CTCTGGGGTG GCAGCGGAAG CCCAAAGCAC CAAAGCAAGC 1560
ATGCTGGAAA CCCACAGCCT CCTCCACTTA GCAGAGCCTT GGGGTGAGAT GAGGCAGAAC 1620
AGGGAGCTGG AGGCAGGGAG GTGGCTGTCT GCACATACCT CAGGACCATG GAGCTGGGGG 1680
AGTCAAAACA GCCACCATAT GGGGAAGGGT CAAGAATGCC TCTAGTCTTC CCCAGGCATC 1740
TTATCAGGGT AAGCTGAATT TGGACCCCAG AGAAGGGATA TCGTTTATGG AGACTTCCCC 1800
TCTTTCATCC CCTGCTCACC AAGGACCCAG TCAGTCTGGG ATGGGGGACA GTGGGAACCA 1860
CTCTTTGGTA TGAGGCTACT CCTATTCTAC TCTTCTCACT GCAGCCTTCC CCTAGATGCC 1920
TCCCATCTGC ATGCTAACCT GTAAACACTT CACCATCACT GGTGGCTAGT 1970