EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-04424

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr12:6807920-6809300

Target genes

Number: 32
Name	Ensembl ID

LOC678655	ENSG00000215039
RP1	ENSG00000256913
NCAPD2	ENSG00000010292
MRPL51	ENSG00000111639
GAPDH	ENSG00000111640
IFFO1	ENSG00000010295
NOP2	ENSG00000111641
SCARNA11	ENSG00000247853
CHD4	ENSG00000111642
ACRBP	ENSG00000111644
ING4	ENSG00000111653
ZNF384	ENSG00000126746
C12orf53	ENSG00000139200
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
MLF2	ENSG00000089693
U47924.11	ENSG00000256010
LEPREL2	ENSG00000110811
GNB3	ENSG00000111664
CDCA3	ENSG00000111665
USP5	ENSG00000111667
TPI1	ENSG00000111669
RPL13P5	ENSG00000240370
LRRC23	ENSG00000010626
DSTNP2	ENSG00000248593
SPSB2	ENSG00000111671
ENO2	ENSG00000111674
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
EMG1	ENSG00000126749
PHB2	ENSG00000215021
LPCAT3	ENSG00000111684

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr12:6808761-6808782	GGGGAAGAAGGGGCAGGAGGA	+	6.21
ZNF263	MA0528.1	chr12:6808764-6808785	GAAGAAGGGGCAGGAGGAGAA	+	6.59
ZNF263	MA0528.1	chr12:6809034-6809055	GAAGAAGGGAGAGAGAGGGGA	+	6.66
ZNF263	MA0528.1	chr12:6808770-6808791	GGGGCAGGAGGAGAAGGAGAG	+	7.48

Enhancer Sequence

AGGGAGGTGG AGTCAGGAAG AAACCACCCC CTCAAATGTG GCTCTCCTGG GTAAAGAATC 60
CTGGGAAAAT CGGGATGGTT GGTTTTGAAA GAGAAAGGGT GTGTTCTCAG AGCTGAGGGT 120
GGTGGATCCA GGAGGGGCAG GCTCCCCAGA GGGAGTGAAG ATAGGATACC CGTTTCCTGT 180
GGATTCTGGG TCTAAATCTG CCCAATGGGC CAGACGCAGT GGCTCACGCC TGTAATCCTA 240
GCACTTTGGG AAGCCAAGGC GGGTGGATCA CCTGAGATCA GGAGTTCGAG ACTAGCTTGG 300
CCAACATAGT GAAACCCCGT GTCTACTAAA AATACAAAAA TTAGCCGGGG GTAGTGGTGG 360
GCGCCTGCAA TCCCAGCTAT TCAGAGGGCT GAGGCAGAAG AATCCCTTGA ACCTGGGAGG 420
CGGAGGTTGC AGTGAGCTGA GATCACACCA TTGCACTCCA GTCTGGGCAA CAAGAGCGAG 480
ACTCCGACTC AAAAAATAAA ATAAATAAAT CTGCCCATTG AATCTTCCCA GAGAACAACA 540
AGGGAACAAG ATGGGAAAGT CACGGGAAGG GCGTGGGGAA GCAGGCAGTG GGAGAGATGG 600
GAAGGGGTGA AGGGCTGGGA GATGGAAGGC TGGTTAAGAG TGAGAGAGGA GAAATGTGAA 660
GAGGAAGCTG GCCTGGAGTG CAGGGTGAGA GAGAGCAGGC AGTCCTGAAA AAGAGAGAAC 720
TGGGAAGAGA GGAGGAGAGT GGGTACAGAA GACTCGAACT GTGGAGGATG CCGAAGGGAG 780
GAAAGGATGA GAGAAAAGGT CAGGGAGGGG AAACGGAGAG GATGAAGGGG TCACAGGTGC 840
AGGGGAAGAA GGGGCAGGAG GAGAAGGAGA GAGCGGTCCA GGCAGGACAG CCAGAGGAGT 900
GGAGAGTAAG GGGATGGGAG AAAAGGGGGG AAAGCCCAGG ATGGGGAGAA AGGAAGTGGG 960
GAAGGAGAGA ACATAAATGC TTAAGGAAAA ATGACACGAG GAACGGGCTG GGAAGCAGAG 1020
GCGGGAGCAG CAAAGATGGA GGAGTTCGGA ATTGCTCCCC CAAATGTAAA GGGATGTGGA 1080
GATACCGAAA GACATAGGGA TGGGGGCATG GTGGGAAGAA GGGAGAGAGA GGGGAAAGGA 1140
AGAAAGCTAG AGGGAGGGAG CGAGGCGTGT AGAGCGAACC AGTGAAGCGG AGAAGGGCTC 1200
CCAGGGCGCA TCTGTGGCCA GCTGACTCTA GGACTATCGC CCCTCCGCCT GTGCATCCCC 1260
ACCCCCAGCC AGCGCCAACC CAGTCCCTGG GCCCCGCACA GCTTCAGCCG CCCCCTCCAG 1320
GAAGCCCGCA GTCCCCGGGC TGGCGCGCCA CCCCCACCCC TCTCCCAGCT TCTCACCGAC 1380