EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-03613

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr11:62412500-62414030

Target genes

Number: 34
Name	Ensembl ID

RP11	ENSG00000255213
ASRGL1	ENSG00000162174
RCC2P6	ENSG00000254454
CTD	ENSG00000255126
SCGB1A1	ENSG00000149021
AHNAK	ENSG00000124942
EEF1G	ENSG00000254772
MIR3654	ENSG00000255508
TUT1	ENSG00000149016
MTA2	ENSG00000149480
ROM1	ENSG00000149489
EML3	ENSG00000149499
B3GAT3	ENSG00000149541
GANAB	ENSG00000089597
INTS5	ENSG00000185085
METTL12	ENSG00000214756
C11orf83	ENSG00000204922
C11orf48	ENSG00000162194
UBXN1	ENSG00000162191
LRRN4CL	ENSG00000177363
GNG3	ENSG00000162188
BSCL2	ENSG00000168000
HNRNPUL2	ENSG00000214753
TTC9C	ENSG00000162222
ZBTB3	ENSG00000185670
POLR2G	ENSG00000168002
TAF6L	ENSG00000162227
TMEM179B	ENSG00000185475
TMEM223	ENSG00000168569
NXF1	ENSG00000162231
STX5	ENSG00000162236
WDR74	ENSG00000133316
SNHG1	ENSG00000255717
SLC3A2	ENSG00000168003

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs118093058

chr11

62413673

hg19

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr11:62412790-62412805	GAGGTCAAGAGATCG	+	6
Zfx	MA0146.2	chr11:62412768-62412782	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

TGTACGAAAC AACTGTTCCA CAGCAGGCCA GACAGAAAAA TGAAGAAAAC ACTAGGCACT 60
GTGGTTTAAT AGGCCAAGCA GAATAAATGC TACCACAAAA CTCCATAGCA AGGCATGCGG 120
CACAGGTCCT GCAGTGAGTG ACCTGAGTGA CTGCAACAGG CACTCTTGGC CACTGACCCA 180
CGTCCACCTG CCAAAAGCAG CAGTAAATAG AAGTACAGTG AGTTGAGGCC GGGCGCGGTG 240
GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GGTGGATCAC GAGGTCAAGA 300
GATCGAGATC ATCCTCACCA ACATAGTGAA ACCCCGTCTC TACTAAAAAT ACAAAAAAAT 360
AGCCAGGCGT GGTGGCGGGT GCCTGTAGTC CCAGCTACTC GGGAGGCTGA GGCAGGAGAA 420
TGGCGTGAAC CCAGGAGGCG GAGCTTGCAG TGAGCCGAGA TCTCGCCACT GCACTCCAGC 480
CTGGGCAACA GAGCGAGACT CTGTCTCTCA AAAAAAAAAA AAAAAGACGT ACAGTGAGTT 540
AAATACCCTC TGGGGCCCTA TTTGCACAGT CTGTAAAATT GGTTCGGAAA GATGCCAATG 600
GAGATAGGAT TCCTAAAGCA TCTTTCAGAT ATGACCTGTT GGAGGGCCCT AAGGAATTCA 660
CGGCGGCCTT GACCACCCCA AGAGAGGTGT TCATAGGCCA AAGTCAGGAA TAAGCTGCAG 720
GGCAAGTTGC ACGCATTTAT TGTTTCAGAT CACAGGCTCC GAGGGAACTG AGTTTATGAT 780
CCACGCTTTC TTCATCGCTT TGGAGAGTAC ACGCCTACCC CACCCCAGTA TATCCGTTAG 840
GTCCTAGTAA ACATTTGTGG CACTGGTGAT ATGTTTCGAA TCTTTTTTTT TCCCCAGTAA 900
TATAAACCCG AGAGCGTGGA CCAAGCCATT CGATTACATG TTGTGTTTGA GCAACACCAT 960
CCACGCCGTG AGCTTACTGG ACCCTGGGCC GTGCCCAGCG ACCGTGGACA CTGAACTAAG 1020
CCAGAGCTGG TGCTCACGTG AAGACAAGGG CAGAGGAGGA TTCGGAGCTC TACAGGGTAG 1080
AGCCAGAAGG GTAGTACAGG CTTAACTGCT GGCCCGGTGC TTCCAGCTCA GCCGAGGGGC 1140
CGCGGGGCCG CAGGCTGCAT TCCCCGAGGC CAGGCCGCAT CTTTTCCCCC GCCCCGACGA 1200
CCCCGCGCAC TGCAGGAAGG GGGCGGCGAC GTTGACCGCC GCAAGCAGCC AAAGGAGGGC 1260
GGCGGCTGAG AGCGGCCAAG ACCAAGAAAG ACGCACAGCT GTGGCTTTAC TAAACCGCCG 1320
GGCGGGAGCC CGGAGCCCCA CAGGCAAGGC CCCCAGCGTC GCTCGGATCT ACCACGGGGA 1380
GACCGGAGGC GTCTGAGGCC GCCTCCAGAG GAACAAAGGT TCCTCACGAG GCCGGGGGTG 1440
GCAGAGTGTC AAGAGACACA CAGGAAGGAG TGGAATGGGA CTTGGGGGAT CTGGGGGCGT 1500
CCCGGGCGCG CCCCCAGATT CCGGGCTCCT 1530