EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-01362

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr1:168367720-168369420

Target genes

Number: 4
Name	Ensembl ID

RP4	ENSG00000224837
GPR161	ENSG00000143147
TIPRL	ENSG00000143155
RP1	ENSG00000237049

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:168368545-168368563	CCATCCTTCATTTCTTTC	-	6.14
FOSL2	MA0478.1	chr1:168368437-168368448	GGATGACTCAT	+	6.62
JUN(var.2)	MA0489.1	chr1:168368434-168368448	AGTGGATGACTCAT	+	6.2
JUNB	MA0490.1	chr1:168368437-168368448	GGATGACTCAT	+	6.62
RFX5	MA0510.2	chr1:168368418-168368434	CGTTGCCTAGGCAACC	-	6.28
RFX5	MA0510.2	chr1:168368418-168368434	CGTTGCCTAGGCAACC	+	6.4

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I168400	chr1	168367761	168367910
GH01I168398	chr1	168368001	168369010

Enhancer Sequence

AGGAGATAAG GATGCAGTGG TGAGTAGGAT AAATAAAATT CCTCTGCTAA AGAAGCATAT 60
GCTCTAGTAG GGAAGACACA AAAAAGTGTA TATTTAGCAT GTAGTATGTA GCAACTAGAG 120
CTAGGAGGAA AAGTAAGATA GGGGAAAGGG ACAGCATTGT CTTTGGGAGG ACCCAGGGTG 180
GAGACAGTAG CCACTCTCCC CTGTTCAGAA CCCAGGAGCA CAGAGTGCAG GTCACAGCTC 240
AAAGGGCATT GTATTTGGCT GTCCAATGTG GCTGTTCTTT TTTTTTTTTT TTTTAATACA 300
AGCATCCATT TTTGTTTTAA GACATGAAAT GAGGGAATGA CCACATATCC TCTCTGTCTC 360
TAATTGGAGA CAGTGAGTTT GGGCAGTTAA GATCCTGGGA TCATAACCAG GATAAGGCAG 420
AGGTGACGAT CTCCTCCTGC CTGGACCCCT GTCCTGGCCC ATCACTACCC ATAGGGTAGG 480
GGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGGTCTGAGT GGGATGGGAA 540
GGTGGATGGC TTGGTATACA TAAGGTCTTT TTCAGAACAC TTGAAATGCA GACCTTGTCT 600
GATAATACTT CTGTGACTCG GGTATATTAT CTTCACAGCT CACAGTTTCA TGGGACATTT 660
GTGCAGATGA AATTGATCAG CAGCAGGAGG AAAATAGTCG TTGCCTAGGC AACCAGTGGA 720
TGACTCATCC AGGCTTTGAA GCAGCCAAAG CCATGAGACT GCAGTAATTT TCCAGATGCT 780
TAACTCGCCT TCCTCTTTCT CTTCTCTTTC GTTGTTTCCC ACTCTCCATC CTTCATTTCT 840
TTCTCCACAC CCACTTCCCT GGATGCTGCT CACTAGATCC TGAGCTCTCT GGAGCAGGTA 900
TTGAGACCTT ATCCCACCAC TGCATATGTG GCTTGATCTG CTGCTGCTCC TCATTCTAGC 960
AACCAGGGGA TGGATGGCCA GGCTGCAAAA GTCTTATTGC TACAGAGCTC CAAGATGCTG 1020
CTTGTTGCCT TTAATCATAA AAAGTTTAAG TGAGTGTAGC ACCTTTTCTC CTAATTGAAT 1080
CTAACCTAAG CTTATCTGTT TGTCTTAGAG ATCTGCAGAG CATTTCTTTG AGGAGAGGCA 1140
GTTAAACCTT GGGCTTCCCC AAGCAAAGTT GTGGAAATGA TATTTAAAGG TGACAAAGCC 1200
CCTTTTGACA GCAGCTCTCT CTGCTGGGTC TTCTCATCCT CTTGGCTCAC CTTTCCTCAC 1260
TCATAGTCTG GGGTCTGATT TTCCAGGCTC TTCTTAATTA TCCACCATAT TCCCCTCTAA 1320
AAAGCAAAGT GATAGACGTT TAAACCATTC CCCTTTCCAA AGGCATTTTC ATTTTAACAA 1380
AGAGCTTTCA AAGGCAAAGT ATTTCAAGAC CCCAAAGAAA AAAAAAATCT TTAATTAGCT 1440
TTTCAAATAC AGATTTAGGC AGAGGGGCTT TGGTGGTGGT CTGTGCCTGG TAAAAAGGTT 1500
TTCCCCTGCA CATCGTATGT GCAGTACCTT CTTTGCTGCT GATACTGACT TTAAAGACAT 1560
TCATATTGGA TACTTGTTGG TGCCTCAATT TTGTATCCCA CCCCACCCCC CATACATGTG 1620
TATTCCATTC ATATGTGTAC ACACACACAC ACCCTTGAGC AGCAGGAGCA ACTGATGGGG 1680
AAAAAACAAA CCCCAAGTGA 1700