EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-01161

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr1:149783150-149783430

Target genes

Number: 25
Name	Ensembl ID

RP11	ENSG00000232151
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H3C	ENSG00000203811
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
OTUD7B	ENSG00000163113
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
C1orf54	ENSG00000118292
APH1A	ENSG00000117362
MRPS21	ENSG00000187145
PRPF3	ENSG00000117360

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:149783191-149783209	GCCTCCTTCCCTCCATCC	-	6.3
EWSR1-FLI1	MA0149.1	chr1:149783195-149783213	CCTTCCCTCCATCCCTCC	-	6.57
ZNF263	MA0528.1	chr1:149783191-149783212	GCCTCCTTCCCTCCATCCCTC	-	6.12

Enhancer Sequence

AGATACAGGT TAAAGGCCGA AGGGGTGTAG AACCACCCCC CGCCTCCTTC CCTCCATCCC 60
TCCCAAATAT CCCAGAACGA GTCAAACCTT TCGAATCTCG TAGCACAGAT AACAAGCAAC 120
TCAGTAAGAC TGGACGGGGA TGACTGAGGG CCAACTCATT ACAGGACTAC AGGAAACTCC 180
TTAGTCCTAA ACCCGAATGC ATCCGTGACC ATGGTAACAC TCCCTACCTG ACCAAAAGCT 240
ATCAAACGCT CTGACAAGTG TTTACAGCTG CTTTCTCGAT 280