Tag | Content |
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EnhancerAtlas ID | HS038-00612 |
Organism | Homo sapiens |
Tissue/cell | ESC_neuron |
Coordinate | chr1:54939520-54942950 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr1:54942611-54942626 | TGACCTTTTGACTTG | - | 6.49 | Nr5a2 | MA0505.1 | chr1:54942777-54942792 | GCTGGCCTTGAACTC | - | 8.25 | PAX5 | MA0014.3 | chr1:54942411-54942423 | GGGGTCACGCTC | - | 7.22 | RFX1 | MA0509.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | + | 6.11 | RFX1 | MA0509.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | - | 6.14 | RFX2 | MA0600.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | - | 6.16 | RFX2 | MA0600.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | + | 6.4 | RFX5 | MA0510.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | - | 6.08 | RFX5 | MA0510.2 | chr1:54940567-54940583 | CGTTGCCATGGGGACG | + | 6.11 | RREB1 | MA0073.1 | chr1:54942000-54942020 | ACACAACACACACACACACA | + | 6.19 | RREB1 | MA0073.1 | chr1:54941884-54941904 | CCCCCACACACACACACACG | + | 6.61 | ZNF263 | MA0528.1 | chr1:54942252-54942273 | AGGGGAGGAAGAGCAGGGGCA | + | 6.01 | ZNF263 | MA0528.1 | chr1:54942201-54942222 | CCCTCTCCCTCTCCCTCTCTC | - | 6.03 | ZNF263 | MA0528.1 | chr1:54941159-54941180 | GAGGGAGGGGCGGGGTGAGAA | + | 6.07 | ZNF263 | MA0528.1 | chr1:54942197-54942218 | TTCTCCCTCTCCCTCTCCCTC | - | 6.59 |
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| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_31249 | chr1:54938939-54943906 | Fetal_Thymus | SE_39825 | chr1:54939624-54940326 | Jurkat | SE_39825 | chr1:54940677-54943821 | Jurkat | SE_55580 | chr1:54939962-54943721 | Thymus | SE_66682 | chr1:54939624-54940326 | Jurkat | SE_66682 | chr1:54940677-54943821 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 54940200 | 54941493 | chr1 | 54941600 | 54942200 | chr1 | 54941159 | 54941412 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I054474 | chr1 | 54939962 | 54943797 |
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Enhancer Sequence | TGCCCCTTTT CCGGCCCTGC CACCCTCCCA GTGCCCAAGC CAAGCACCTG AGCGTTCTTA 60 TCCATTGCCA CATCCAATCC ATAGGTCACC ATTCTGCCAT GTTACTTCCT TAATAGCTCC 120 TGATTCTGTC CCCACCTTCC AGTGACTTTG CACCTGCCCT TGTTCAGGCC TTATCATCTT 180 TCAGAAGGAC CACTGGTCCT TCCAAGCCAT TCCCCATATG GCAGCTAGAG TGGTCTCTGG 240 GAAAGGAAGG GGCCACATCA CACCTCTGTT CAAAACCATC CATGGCTCTT GTCCCAGGGC 300 TCTCCTTCTA AAAGCCCAGT TCTTCTACAC TCCCCAGCAA CACTCAGGGG CTTTGCAAGT 360 CTCCCTTCCC ACCTACCGAC CCTCCCATAC TATTTTCCAC CTTTGTGCCT TTGCTGATGC 420 TGTTCCCTCT TCACCTTGGC TTCCTCAGTA ACTGCCACTT CCTAAGATTC CAGCCAGCCT 480 CCCTTGCTGC CCTAGGCTAG GTTAGGGCCC TCCACTTCTC CCTCTTGCAA CACTTGCCCC 540 TGCAGTAGTA ATAATAGGTG ACACTGATGG AGTGCTAACT CCATGCATTT TTCTTTATTG 600 GCCCATTTAT TCCTCCTCAT AAGCATTCTC TGAGGCAGGT TCTATGGTTA CCTGCATTTT 660 TCAGATAGGT TAACAGGTTA AGGGGAATGC TTGCAGTCAC ACTGTTTGGG GACTGGAACC 720 CAGGCCAGCT GCCTCCAGAA AGCTGGCTTC TAATTCCAAC ATGTTGCCTC CTGCCGCAGT 780 GAGTGGGGAT TTGGGGGTCT CTGCCTCCAG GGCTAGAATG TGAGATCGCG GAGGGTTGAG 840 TGGCTTTTGC CCCACATCCT GCGGCCAGCA GCCGGCCATG GCTAGGAGAG GCGCCCGACG 900 CCTGGCGCTC CCCGTCCGGG TCTCCGGCCG CTGCGGGGCT GTGAGGGCCC CCGGCGGTAC 960 CGGCCGGGGG TGGCCCAGCT GGGGTGGGCT TGGGGCCAGA TGGGCTGCGC AGCGGCGGGG 1020 AGGCAGGGCC GGCAGGCAGG GGCCGCGCGT TGCCATGGGG ACGGGGGTGG GGGCGGCAGC 1080 CCCGCCCGGG CGCAGGGGGA GCAGGTGGCG GGTCGGTGAG CAGGCTGGGG GAGGGGCCGG 1140 AAGGGGCCCG CGGGGTCGGG GCGCGCCCCC GGCTCCTCCG CCGCCTCCCA GCATAGTGAC 1200 TCCGGCTGCT CCCTCCGAGA TCCGGGCCCG CCGCAGAGCA AAGGGGTGGG GCCAGGACAC 1260 TCAGGGGCCA GGACACTCAG GCTCCAGTCC CAGTTTAGGC TCTGATTCCC TGAGCATCTT 1320 GGGCAACTCA CCACCTTCTA GCCTCAGTTT CCCCGACTGT GAATGGAGGG GTTGGACCAG 1380 GTTTCCAAGG ACATTCCCAG CACACACTAC TTTTTGTGGC TCTGGGGCTG GGCGGGGAGG 1440 ACTCAGGGCT ACGTAATTTT TCACCCTCTT CCCAGGTGAA GACTTTATTT TTTCAACAGA 1500 TGACATCCAC CGTTGTATCC TGAACCGGGG AATGTCAGTT GTAAGAGCCG GCAGTCTCTG 1560 TACCCACCAC CTCCATTGTA GAGATGGGGC CGCAGCAGCT CAGAGACGGT GCGGACCGTG 1620 TCGATCACAC AGCGCATGAG AGGGAGGGGC GGGGTGAGAA ACCCGGTTTG AACCTCACAG 1680 CACCCCACCA TCACCTCCTG CCTTGGAGCC GAAACCGGGT TTGGGCATGG GGGAGGGGCA 1740 GTTGCTGTGG GAAGAAAACA AACACCCCTG CGCTCCGGTC TGCAGGCGCC AGCTGCCAAG 1800 ATGGCAAGGA GACTGACTGC CTGAGTGCAG ACCCGAGGCA GGGGCTTCCT GTCTGCGAGG 1860 AGGCCCTGGT GGCTGTTCTC CCACTGCCCA CACCCTTCTG GTCTCCATCA GTGACTGGTA 1920 CAGCGCCGTG GCCCTGTTGC CAGCCTTCAT AAGAGGTGTG GAGGTGGTAA CCTCCCTCCA 1980 CCCACCCTCA CCCTAGTAAG CGGACAGCCA GGATCCCAAC CAGACAGTTT TGCCCCAGTG 2040 CTGGGCCTCC TCTCTCCCCG GCCCCCCAGT TCTCAGGGGA GGCCCGGCTT TCCTGGGGAA 2100 TAAAGCCCCT TTCTATTTTC TCCTCCTGGA GGACCCATTT CTGAGTTCTC AAAGCCTTGG 2160 CTATGGAGGG GGTGGTTCTG AGAGGGCTGG GCTTGCTTCT CTGCCCTCTG GCTGGAGTCG 2220 CTGGGGACAG GCTCTGCTCG GGTTCCCAGC TGAGGGTGGC GGGAGGTGGT GCTGGGGGTG 2280 GGGGATGGTA GAGGGGAGCA GGCAGAGGCA GGGTCTGTCC CTTTAAGGTA CAGCTTGCTG 2340 CTGAAGCGCC ACACACACAC ACAACCCCCA CACACACACA CACGCCAGTC TCTCTCTTGC 2400 ACACAGCCAC ACATACACAC ACACACACTC CCAGGCTCTG TTCTCTTTCC CTCTCCGTGT 2460 CACCCTCCCT CTCCACACGC ACACAACACA CACACACACA CTCCCAGGCT CTGTTCTCTT 2520 TCCCTCTCCC TGTCACCCTC TCTTTCCACA TGCACACAAC ACGCGCACAC ACACACACAC 2580 ACACACACAC ACTCTCTCAG GCTCTGTTCT CTTTTCCTCT CCCTCTCTCC ACACAGGATA 2640 TACGCACTCA GCCACACACA CAGAAGCATC CACACTTTTC TCCCTCTCCC TCTCCCTCTC 2700 TCCCCAAGGT CTAGTTTTGA AAAATATAGG CAAGGGGAGG AAGAGCAGGG GCAAGGAGTT 2760 CTGACCTAGA AAATGGGCCC TGCCTCCTTC TGTCCCTCCC AGGCCCGGGA AAGGGGGCTT 2820 ATTTTTCCAT TTGGTTTCAC TGCCCTGGGT CAAGGCTGCA GGAAGAAATG GAGCCCCCCA 2880 TGCAGAAGGT GGGGGTCACG CTCCTGGAGA GGGAGGGAAG GGGCTGCTGG GCTATGGGCC 2940 TAGCCTGTTG GACACAAACC CAGGAATCAG GGAGGAGCCT CCCCCTTCCT TCCCTACTCA 3000 TGCAACATGG GGCTTGCTTC TAGCACAGAG GAGGAAGCAG GTTTAGGGAC AAAGTAACCA 3060 GGGTAGCTTA GCCACAGAGG GATGGACCAG TTGACCTTTT GACTTGACTT ATGATGAAGG 3120 GGCCCTTGAC CCTTCTTAAG TCATCTTACA CCTAGAGTCA AATCCTGGAC TAGAATTCTT 3180 CCCAAACCCC TGGGATAAGT CCTTCCTTCT TTTTTTATTT TTATCTTTTA GAGACAGGGT 3240 CTCGCTATGT TGTCCGGGCT GGCCTTGAAC TCCTGGGCTT AAGCAGCAGT CTCCCTGCCT 3300 CAGCCTCCTG AGTAGCTGGT ACTACAGGTA CAGCACCACC AAACCTAGCT CCTCCCTTCT 3360 TTTTAACGAA CATTCTTGCT GTGGTTCCCT GTAGGGGCTG GGAGTGTACT CTCTGTGTGA 3420 CTCTCAGCCT 3430
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