EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-00552

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr1:46931640-46933360

Target genes

Number: 9
Name	Ensembl ID

PIK3R3	ENSG00000117461
POMGNT1	ENSG00000085998
RAD54L	ENSG00000085999
LRRC41	ENSG00000132128
UQCRH	ENSG00000173660
NSUN4	ENSG00000117481
FAAH	ENSG00000117480
ATPAF1	ENSG00000123472
KIAA0494	ENSG00000159658

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:46932182-46932192	GCCCCGCCCC	+	6.02
ZNF263	MA0528.1	chr1:46933300-46933321	GGAGGCAGGGGAGAGGGAGAG	+	6.03
ZNF263	MA0528.1	chr1:46933297-46933318	GGAGGAGGCAGGGGAGAGGGA	+	8.2

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I046466

chr1

46931725

46933408

Enhancer Sequence

GCCCCAATGC TTGTCCTCTA GACATTCCCA GAGCAGGTTC CTTCATGCCA TGCAGATTTC 60
AGCCAAAACG CACCTCCTTA AGAAGCCATC TTTGACCACT CAGTCTCATT TACCTCCCCT 120
TCCCCTACAG TCACTGCCAC ATCACCTTGC TTTATTTTCC GTTCATTTAT TTCTTGTTTC 180
CTGTGTGTCG CCTGCCTCCT TCACTAGAGT CAAATTCCAC GGAGGCAGAG ACGGGGTCGG 240
TGTGGCTCAC AGGGGTATCT GCCGAACCCC AAACAGCGCT GGACACACAG AAGGCGCTGG 300
GAGAAGGAAG AGGCCTCTCT GAACCTGTTC CCTCACCTGG AAAGTGGGGC TAATCACATA 360
ACCCTGCAGT CTCTGAGGTG GTTGTGAGGG GGATTCAGAG AGGGGACCCG GGGAGCTCTG 420
AGCGCAGTGC CAGGCCCGGA CGTGGTCACC GCCTTGTCAC TTGCGCATTT CATGCTCTGG 480
CCTCCCAGGC CGGGCGATGC GGCCGCGGGG CTGCAGCTCC CGGCGAGGCC CGCCAGGCCC 540
CCGCCCCGCC CCGCCCTCCT CGGGCCCCGC TCCTTCCCAG GCGCCCCCGC GCCGCCGGCG 600
CTTTGAAGTC CCAATCCGGC AAATAGAGTC AATCAATTAT GAAGGGAACA ATCTGGCGGC 660
CCCTCGGGGA GCGGCGGCCG AGCGATCCCG GGGGATTAGG CCGCAAATCG CGCTGAGCCT 720
CCCTAAGTGA CAGCGAGAGA ATCGCGCGCG GCGGCGACGG CGGCGGCGGG AGCGGGAGGG 780
AGCGCGGCCG CTAACCCGAT TATGCAGATC CGCGGGGGGC GCGGATTAGG CCTCGGGGGC 840
GGCTTCGCCC TAAGCGGCTC TCGGATTTGG GAAAAGTTTA CTCGGGCGGA GGGGGCGGAG 900
ACTCCCCCGG GCGGGCGGCC GGGACTTCTC CCAGCCGGGT GAATGGAGGA CCCGCCTGCA 960
GGAGCAGCCG CGAAAGAGTG GAGCGGGCGC GCCTGCTGAG CCACAGCCAC AGCAACACTT 1020
TGCAGGCGTG CACACTCACA CGCACACCCA GGCCACAACA GCCGTGTCTG CACCAGCCCA 1080
CGGGCGCACG CGCGCTGCCC ACGATCACCC TCCCAAGCCA CAAAACACTC GCGAACGTGC 1140
GAGGCCGCAC CAGCCCACAT AGCCAGACCC ACGCCGGCTC ACACGCGCAC GCAGCACTGC 1200
CTCGTGCTCA CACAAGCATG CACGTACTCA CAGACACGCA ATTTGATGTT CGGATACCTG 1260
CCTCCTGTGG TTCCAGCAGA ATCCCTCAGT GACACAAGGT GTCCCTGCCA GCCTATGTAG 1320
ACGTAGGACT GGTGCACGGC CCTGCACCTG TGCTCTCCCA CGGACCTCCC TGCAGCTCCT 1380
CTCCTCTGAA GGACCTTGAG GACAAGTGTG TGTTAGTGTC TGTGAGTGTG TGTGTGTGTT 1440
TGAGCGTGGC CTGTCTCTGG AGTCTGGGCC CAGTTTTGGC TTCTGCAACT GGGGCCTTCT 1500
CAGGGTAGGT GGAAAAGACT GAGGCAGGAC GCTGGGATGG AAACAGGCCG AGTCCTCTTG 1560
GTGACTCTGG CTAAGGGGTC CTCTCCGCAG GGCTGGGGAT CCAAGACATT CCTCACCAGG 1620
CCCCTCTGGG CCAGCCCCTT CCCTGAGGTG CTATCAGGGA GGAGGCAGGG GAGAGGGAGA 1680
GTGGCTTCCT TTTACCCATC TAGGAAAACG ACACAGAACC 1720