| Tag | Content |
|---|
EnhancerAtlas ID | HS038-00228 |
Organism | Homo sapiens |
Tissue/cell | ESC_neuron |
Coordinate | chr1:19729480-19733570 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| LHX6 | MA0658.1 | chr1:19733130-19733140 | ACTAATTAGC | + | 6.02 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_01631 | chr1:19729434-19730718 | Aorta | | SE_04046 | chr1:19731328-19733366 | Brain_Anterior_Caudate | | SE_05077 | chr1:19731030-19734207 | Brain_Cingulate_Gyrus | | SE_05833 | chr1:19730880-19735789 | Brain_Hippocampus_Middle | | SE_08066 | chr1:19731088-19734322 | Brain_Inferior_Temporal_Lobe | | SE_18410 | chr1:19732457-19734646 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_25786 | chr1:19731051-19733061 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19729470-19730696 | Esophagus | | SE_26537 | chr1:19730851-19733315 | Esophagus | | SE_28668 | chr1:19731492-19733373 | Fetal_Intestine_Large | | SE_29645 | chr1:19731386-19733065 | Fetal_Muscle | | SE_31164 | chr1:19730964-19735510 | Fetal_Thymus | | SE_31447 | chr1:19731354-19732036 | Gastric | | SE_31447 | chr1:19732085-19733041 | Gastric | | SE_42185 | chr1:19732134-19733184 | Lung | | SE_48688 | chr1:19731333-19732041 | Right_Atrium | | SE_50058 | chr1:19730882-19733749 | Sigmoid_Colon | | SE_51211 | chr1:19731149-19733268 | Skeletal_Muscle | | SE_52345 | chr1:19730988-19732107 | Small_Intestine | | SE_52345 | chr1:19732131-19733457 | Small_Intestine | | SE_53453 | chr1:19732444-19733243 | Spleen | | SE_54550 | chr1:19730819-19736421 | Stomach_Smooth_Muscle | | SE_65446 | chr1:19730704-19731789 | Pancreatic_islets | | SE_65446 | chr1:19731857-19733127 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 4 | Chromosome | Start | End |
| chr1 | 19732057 | 19733024 | | chr1 | 19730887 | 19730975 | | chr1 | 19731710 | 19732006 | | chr1 | 19733070 | 19733566 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I019402 | chr1 | 19729435 | 19730718 | | GH01I019404 | chr1 | 19730961 | 19734900 |
|
Enhancer Sequence | TGCAGTGAGC CAAGATTGTG CCATCACACT CCAGCCTGGG CAACAAGAAC AAAACTCCAT 60
CTCTAAAACA AAACAAAAAA AAAGAAGCCT TGCATTCTAT CCATCCTGGG TTATCTGGCT 120
CCCACCGTGG CTATGAGCTC TTTAAAGACA CAACTATTCT GTTGTCACTC TGACCCTGGT 180
GCTTCAGCTT AGGCAGGGCC TTGCATTCAT GGGGGCTCAA GTAGGCATGC ACTCACTGAA 240
TGTCCGCTTC AGGCTTGACA GTGGGGATAC AAAGGTGAAC AAAAGAAAAG ATCCCTGCCC 300
TCCAAGAGCC AAAGCTCCTA GGATGGAGCA AGTCCAAGAG ACAGGAGAAG CAAGGGGCAT 360
GCTGGGGGGC AGGGTGAGGG AAGTGAGGCT CCAGCGGAGA TGGGAAGATG AGCAGTTAGA 420
GGGAGCAGAG TTGGTGTGGA CATGTGTCCC AGTCAAGGAA ACGGCATGTA CAAAGATGCA 480
ACAAGACAGG GCACAGGCCT GGGAGTGTGC AAGACAAGGA GACAGGAGGA AGGGGCAGGG 540
CCAGATCAAG AGCTCTTCCA CCTAGATGTG TTCTCCGGGC TTGATCCCGA CAATGTGGAG 600
TCATTAAGGG ACATTATCCG AAGTGCATTT TGGCAAGACT ACTCTGTATG CAGAGCAGGC 660
AGGGGATGAC AGGCAGGAAG GCCTGTCTAC AGGCTATTAT AACACTCCAG TAATGCAGGG 720
AGGAGCAGTA GCAATAAACA TTCATTGAAC TGCTCTAAAA TGAGGATTGG GACATACCTT 780
CACCCAACAG GCTGGATAAG GTGGATGGCA CTCTGTAAAA AAGTGACCCC GCTTTGGGCA 840
GGTGGAACTA CATCTCCACT GGCCTTCAGC AGCCTGAGCT GCACCCAGTG CCCCTTCTGC 900
CTGCCTCCCT CCTGGACTCC AGCCGCAGTT CCTCCCTGTC ACATGCCCTA CTTAACGCCT 960
GCAGCATCAA GACTCAAGAG GTTGAAGTAC AAGAGGTAAC AGTAGTAGGC CGGGCACGGT 1020
GGCATCACTT GAGGTCGGGA GTTTGAGACT AGCCTGGCCA ACATGGTGAA ATCTCGTCTC 1080
TACTAAATAT ACAAAAATTA GCTGGCTATA GTGGTACACA CCTGTAGTCC CAGCTACTCG 1140
GGAGGCTGAA GCAGGAGAAT CGCTTGAATT GGGCAGGCAG AAGTTGCAGT GAGCCAAGAT 1200
CGTACAACTG CACTCCAGCC TGGGAGACAG ACTGAGACTC CATCTCAAAA AAAAAAAAAA 1260
AAAAAAAAAA AATATGGCTG GGCGCAGTGG CTCATGCCTG TAATCTCAGC ACTTTGGGAG 1320
GCCGAGGCAG GCAGATCACT TGAGGTCAGG AGTTTGAAAC CAGCCTGGCC AAATTGGTAA 1380
AACCGCATCT CTACTAAAAA TACAAAACTT AGCCAGGCAC GGTGGTACAG GCCAGTAGTT 1440
CCAGCTATTC CAGACGCTGA GGCTGGAGAA TCACTTGAAC TCGGGAGGTG GAGGCTGCAG 1500
TGAGACGAGA TCACGCCACT GTACTCCAGC CTGGGTGACA GAGCAAAACT CCATGTTAAA 1560
AAAAAAAAAA AAAAAAAAGA GGTAATGGGA AAAATGCTCG CTTGTCATTG CAAGATCTGA 1620
GCTCACCTCA CAGTCCCTCT CCCACCTGGA AGAAGGCAGG ACATTTCAGA GCCCGATCAA 1680
GCAGCATTCA CCCACCTATC TGGCCAAACA GGGAAACGCA GGCTGCTTTT GACAAGGGGC 1740
ACGCACCCTC CTCCTTAAAA GGACAGCTCA GCAATCATGG GAAAGCAGTG GATTCCAGCC 1800
GCTCCTGTCA GGGATTCCAC CACCTTCTTT GGATGATTTG CACCAAGTAT TTTCCCTACA 1860
TGACTTCCTT TAATATTCAC AATTGTCCTC TTTTAGAGTG AGGCAAATCC AGAATTCTCT 1920
CCATTACACA GATGAGGAAA CTGAGGCCTG GAGTCTGGTA GCTTACCGAG GGTCACCTAG 1980
ATATTCAGGA TGCATGCTCC CAGCCCCAGC TAACTCATGA CTCCGTGACC TTAAAGACTC 2040
TGTCCATATA CTGCCACCTG CCGGGACCAC CAGCCCTTGA GTCCCAGGGG CTGAGGTCTC 2100
CTGAGTCATA GCTCAGCTCC AAGAGGCATC CGTCCCTTCT CATCTCTGGG TCTCAGATCA 2160
CACAGCCTAG AATGTCTAAT GTGGACTCCC CTCAGAATTT GGGGATAGCA GGGTTTTTGG 2220
TTCATTATCT CATATTTATT TGTGGCCATA TCGACATGTG GCCAGGCACT GTGTTAGGGT 2280
CTGGGGATAG AGGTGAGCAT CATGGCATCC CGCAGGTGCT CGGAAGCCAG AGGGCCCTCC 2340
AGTGCTAAGA GTACAGTTAC AGCACACAGC AGTGCTTTCA GTGCGTTAGA TAAAACGTGG 2400
AGATTTGGCT GCCCCTACAG GCAGCGTTTG GGACTAGGAA GGTCAATGAG ACAGGAAAAC 2460
AATGCGGGCG AAGAAGTATT AAGCCTCTTT AAAACACCTG ATGTACATAT CTCCTCTACT 2520
CCCAACTGAT GTTCAACACA TAGCTAGAAA GAGGCAAAAA AAAAAAAAAA AAAAAAAAAT 2580
CCCCTTGTAT GAAGGATAAT CCTTTCAGCC TGGGGCAAAT CTCCTGAAGA GTTTTGTTCT 2640
GAACTAGGAG TGTTGTTTTA GCTTCCAGTC AATAGTAATT AAGAGTCCCA ATATATTCCA 2700
GAAAGAGGGA GAGGGAGATT AACGATCATT AAATCTCTTC TGCATTTGGC TCCAAATCTC 2760
TTTTCGGAGG GGCCGGCTGT CAGATGATCC CTCCAAAGCG TCCATCTGAC AGCACTCCCG 2820
CCGCCACCAT CTGGAACATC AATTCGAGAG CTCGCCTGAA GGTTTCAATT ACATAAAAGG 2880
CAATGGGCCC ATTAGGACCC GAGAGTCTGG AGCTTCACAA GCGCTGCTCA CACCCCCTCT 2940
CCTGTACACA AAGCCTCTAG AATTTGGTTG GCAGTCATTT GCAAAGGGAC TCATTTTGGT 3000
GGGGGCATGG GGCTGGCCAG CCCCTTGGCA AGGCCTCTCT CAGGCAGGCT CTGTGCGTGC 3060
TATGACTGAC AGGGTCTCTA ATGAACCTTA ATTGTGAGCT CGACAGGCCC AGGAAGGCAG 3120
CCACAGATGT GGCAAAGGGC AACCGCAAAC CGTCTGATTA GTGAATAAGA AGTGTCCGGC 3180
CCAGTGAGGG CCAATGACCC AAAAAAGGAG GAGGGCGGGA CTATTCCTCC CCCACGCATC 3240
CCTTCTAAAG CTCTGAAGCT TCTTTATGTA AGCAATGCAA AGCCTCTGGG TGCACTGGAA 3300
CCCAACGCAC CCCTCCCCCC GGCACTACTG CTTGGCAGCT GGCAGCTGGG ATGTTGGGGT 3360
CTTGTGCTTG TTACCACGGA TGCTTCCGTC TCCATCAGCA GTGCACCTTT AACCACAGGA 3420
GGCCAGAACA GAACGCCCTT TCAACGTGGG AAGGGGGAAG CTACCCACTA CGGAGACTGA 3480
GTAACTTCTT GCCGGTGCTA AGAATTGTGA AGACAGCTGC ATTCAGAGTC AGCCATCCTC 3540
TGGTGACCTG CAGTGACAAG GAGAAAGCTA CTCCTGGGGC AGCTTTGGGC ACAAACAGCG 3600
TGACGGAGAA GACAGGCTTT GCAGACGGGT AGATCCCAAC TCTGCTCCTT ACTAATTAGC 3660
TGTGAGGCTT GGACCAACTC ATGAAACCTC ACTTGGTTTC CTCATCTGTA AAATGGGCAT 3720
AAAAGATCAA CCTTGTGGTG TGCAGTTTAA ATAAGCAAAG GGTCTGGAAC AGTACCTGGC 3780
ACACGATAGT CATCTCTTAA AACCCGGGAG AACAGCAGAG TATTTTGCGC AAGTTTGACA 3840
TGACCTCAGA ACTCCATGCA GACAGCTACT ACAAGCCAGG TACTATGCTA GAAGCTTTAC 3900
ACCCCCCATC TCTCATTCTT GAAGTTAGTG TCATGCCCAT CTCACAGATG AGGAAACTGA 3960
GGCTCAGTGG TCACACAGCT AAGACGTGGT AAAGACAAGA GCTGAACAGG ATTGTGCCTT 4020
TCGATTTCAA GGCACTCCAC TATCAACTTC AATGCTCCTA ACCAAGCATT TCAGGCATCC 4080
TCAGACTAAC 4090
|
