Tag | Content |
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EnhancerAtlas ID | HS038-00200 |
Organism | Homo sapiens |
Tissue/cell | ESC_neuron |
Coordinate | chr1:17230300-17233770 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NKX2-3 | MA0672.1 | chr1:17232669-17232679 | ACCACTTGAA | + | 6.02 | RREB1 | MA0073.1 | chr1:17232869-17232889 | TGGTGGTGGTTGTTTTGTTT | - | 6.63 | ZNF263 | MA0528.1 | chr1:17231395-17231416 | GGAGGAGGGTGGGGCGGAAGA | + | 7.87 |
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| Number of super-enhancer constituents: 66 | ID | Coordinate | Tissue/cell |
SE_01476 | chr1:17230218-17232448 | Adrenal_Gland | SE_02875 | chr1:17229707-17232419 | Astrocytes | SE_03430 | chr1:17229559-17230655 | Brain_Angular_Gyrus | SE_03430 | chr1:17230704-17232518 | Brain_Angular_Gyrus | SE_03430 | chr1:17232532-17233482 | Brain_Angular_Gyrus | SE_04111 | chr1:17229411-17233706 | Brain_Anterior_Caudate | SE_05172 | chr1:17229358-17235180 | Brain_Cingulate_Gyrus | SE_06210 | chr1:17229404-17235529 | Brain_Hippocampus_Middle | SE_07232 | chr1:17229372-17233463 | Brain_Hippocampus_Middle_150 | SE_08076 | chr1:17229224-17235365 | Brain_Inferior_Temporal_Lobe | SE_08889 | chr1:17230756-17231745 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17231799-17232278 | Brain_Mid_Frontal_Lobe | SE_10448 | chr1:17229556-17232759 | CD19_Primary | SE_11024 | chr1:17229104-17234222 | CD20 | SE_12131 | chr1:17229519-17232577 | CD3 | SE_12131 | chr1:17232682-17233336 | CD3 | SE_12912 | chr1:17229894-17232147 | CD34_Primary_RO01480 | SE_13570 | chr1:17229822-17232807 | CD34_Primary_RO01536 | SE_14124 | chr1:17230231-17232303 | CD34_Primary_RO01549 | SE_14531 | chr1:17229468-17233435 | CD4_Memory_Primary_7pool | SE_15440 | chr1:17229663-17232792 | CD4_Memory_Primary_8pool | SE_15839 | chr1:17229579-17232410 | CD4_Naive_Primary_7pool | SE_16401 | chr1:17229825-17232799 | CD4_Naive_Primary_8pool | SE_17223 | chr1:17229783-17232430 | CD4p_CD225int_CD127p_Tmem | SE_17702 | chr1:17229386-17234307 | CD4p_CD25-_CD45RAp_Naive | SE_18224 | chr1:17229114-17233125 | CD4p_CD25-_CD45ROp_Memory | SE_19865 | chr1:17229525-17232518 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20182 | chr1:17229398-17233461 | CD56 | SE_20877 | chr1:17229554-17232585 | CD8_Memory_7pool | SE_21501 | chr1:17229448-17232520 | CD8_Naive_7pool | SE_22012 | chr1:17229449-17232551 | CD8_Naive_8pool | SE_22656 | chr1:17229502-17233323 | CD8_primiary | SE_23911 | chr1:17230736-17232315 | Colon_Crypt_2 | SE_25305 | chr1:17229819-17232413 | Colon_Crypt_3 | SE_27153 | chr1:17230113-17232833 | Esophagus | SE_28353 | chr1:17229567-17232686 | Fetal_Intestine | SE_29508 | chr1:17229623-17232662 | Fetal_Intestine_Large | SE_29649 | chr1:17229432-17233478 | Fetal_Muscle | SE_31118 | chr1:17229456-17233699 | Fetal_Thymus | SE_31881 | chr1:17230221-17233716 | Gastric | SE_33013 | chr1:17230687-17231347 | H1 | SE_33013 | chr1:17231409-17231769 | H1 | SE_33540 | chr1:17229437-17232524 | H2171 | SE_35172 | chr1:17229620-17232760 | HeLa | SE_40019 | chr1:17230206-17233254 | K562 | SE_42843 | chr1:17229839-17233510 | Lung | SE_45444 | chr1:17230015-17232389 | NHLF | SE_47744 | chr1:17230287-17230700 | Pancreas | SE_47744 | chr1:17230737-17231745 | Pancreas | SE_47744 | chr1:17231842-17232377 | Pancreas | SE_51608 | chr1:17229337-17233624 | Skeletal_Muscle | SE_53155 | chr1:17229646-17233509 | Small_Intestine | SE_53544 | chr1:17229560-17233365 | Spleen | SE_54964 | chr1:17229200-17233698 | Stomach_Smooth_Muscle | SE_55554 | chr1:17230186-17232572 | Thymus | SE_55554 | chr1:17232592-17233362 | Thymus | SE_57675 | chr1:17230728-17231731 | VACO_503 | SE_61917 | chr1:17221528-17256732 | Toledo | SE_63124 | chr1:17215209-17241689 | Tonsil | SE_63250 | chr1:17222916-17254487 | GLC16 | SE_63321 | chr1:17222804-17249569 | NCI-H82 | SE_65449 | chr1:17229946-17232220 | Pancreatic_islets | SE_66885 | chr1:17229437-17232524 | H2171 | SE_67172 | chr1:17229191-17233453 | MM1S | SE_67642 | chr1:17229424-17231931 | u87 | SE_68996 | chr1:17230801-17231800 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 17233422 | 17233683 | chr1 | 17231253 | 17231704 |
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Enhancer Sequence | CAACTATAGA ATTGGCCGAG ATATCTCTCT CTCTCTCTCT CTCTCTTTTT TTTTTTTTTT 60 TTCCATGTTG TGATGCCACA CCAGTTCAGC TTTTGGACGC TGTTAAAAAG AGAGGTCTCC 120 TTCCCTCCCC TGACCCCCGT GTGGGACAGG ACTATCTGGG AATGAGCCAT TCTGGCAAGG 180 AGGGACACAG CTTTTGATCG ACAATGCTTT CAAGAAATAC TTTTTTTTTT TTTAAACGGA 240 GTCTCGCTCT GTCGCCCAGG CTGGAGTGCA GTGGGCGATC TCAGCTCACT GCAAGCTCCG 300 CCTCCCGGGT TCACGCCATT CTCCTGCCTC AGCCTCTGCG AGTAGCTGAG ACTACAGGCG 360 CCCGCCACCA CGCCAGGCTA ATTTTTTTTT TTTATTTTTA GTAGAGACGG GGTTTCACCG 420 TGGTCTCGAT CTCCTGACCT CGTGATCGGC CCGCCTCAGC CTCCCAAAGT GCTGGGCTTA 480 CAAGCGTCAG CCACCGCGCC CGGCCAAGAA AGACTTTTCA TCTAAAGGGA GAATGGGGAA 540 AGAAGAGAAC TTTTTTATTT TCAAATTCTC AGGCCCAGCG AGGCATTACA TTGAGACAGC 600 AACCACATTC TGCTTCCTTT TTGTACACTA CTGTATTTGA AAAACAAAAA AACAAACCTA 660 CAAGACTCAT AAAACTGGAC AACTTTCTTT ATAACACTAC TACTCGTAAA ACCAGTAAGG 720 ATGGCTGGTT TGCAGTTATC TGAGCAGCTT CTCTAGTTTC ATAGACATGA TTTCTCTCTG 780 TTATTAAAGG GCTCCCAATT TTAAGTGGAA TGCTACTTCA CAAAGATAAC CAGGTTTGAA 840 AGGGTCCGGT TTGCTTTGTA ATCCGAAACG TTCCAGTCTG CTATTAAAAG CCATTATTTG 900 AAGACGGGTG CACAGGCTTC CAGCTGCCCG CCAGAAGGGT CCTCCGCAGG ACACAGGTTA 960 AGTAATCACT TCTTCGGGGG AGACTAGATG CAGGGTCTCG GCGCACCTCC CCAAAAGACA 1020 AGGGCGAGAC AGAAAGGAGG GACAGGCGGA CGTCACTTCC CCCGCCGGCT GCGGCACCGG 1080 GTTGGTGGGC TGAGTGGAGG AGGGTGGGGC GGAAGAACAG AAGGGGACTG GGAAAGGCAC 1140 TGTTGGTGAC ATCACCGATA GGGCGTTTCT ATGTAGATGA GGCAGCGCAG GGGCTGCTGC 1200 TTCGCCATGA AGGATTTCCC GTGCTGTAGG AGCAAGTCCG GGACCGCTGG CTGGACGTGA 1260 GCGTCCTAGC TGTGCGTTAG GGCTAGGAGG GCTCAGGGTG ATTGGGGATT GGCTGGGGTG 1320 GTGCTCGGGG CAAGTGACCG TGCGTGTAAA GGGTGAGGCG TATGGAGCTG TGGCGGGGCG 1380 GAAGTTCACA TGTGTGGTAT GTAGAGCACA TGTTATGGTT ATCAAAGTGG TTTACTGTAA 1440 GGCTGAGGGC TATGCATTCT ATGGCTATGT TGTTGTCTCT TATTTTTCCA AACGTGGAAA 1500 CCTCTGTTTT GTAACTTGTA GTAATAAGGT AGAAATTAAA AAGAAAAAGT ATTTTCCTGT 1560 ACTTGCTTGG CTGCAAGGTC AGGAACAGAT AGTTTCTGAA AAACCACATC GCTGAGAAAT 1620 GAGTTCTGGA GACTCTCTTA ACAGTCTGTT ATCCCTAGGA AGGATAAGAG CAAGAAACAG 1680 CAAATGCTTT TATTACCTTC TCTTTTCCCT TTACCATTTC TCACTATTCA AGTTTTGTTA 1740 AGTTCTTGAT TTCCCTTCAG TGCAGCTGCA AGGTCACCAG CTATTCTTGC CTCGTGAGAC 1800 CTGTCACAGT TTGACTAGCT GCCTTTGTTC TGCTTCTGTA AGCCCTCTTG CCTGCCCCGC 1860 GAGTTTGGTG CCATCATAGT CCCACCATGC CATTCAAACT AGCCAACCCC CTTTTTGAAG 1920 TGTGTATAAA AGTCAAACCC TGTCTTTGTT CGGGGCTCAG CCTTTGGATT TTAATCCTCT 1980 GGGCCTGAGG GCACTCAATA AAATCCTCCT GTTCCACCCA TTGGTCTCTC TGTTCTCCTG 2040 ATTCCCACAA CAGTAGTAGG GGACTGTGTC TGCACTTTCC CCTGGTCTTT CACGGTATGA 2100 ATAATAGCCT TTTTTTTTTC GCCTATAGTC GCAGGCTCGG TCTCAGTGAT TTTATGGTGT 2160 GGTCAGCTGT TTTTGTTTTT GTGAGACCTT GTTTACTGTC CTGGGACAGA TGTCTGTAGT 2220 CACTTGTTTC CTTGGGAGGC AAATTTCAGT CTCTGTGGCA GAGGTCTCTC ATGTTAGCTG 2280 TGGTGGTACT TGGCAGGCGG AGCTCAGGGA TCTAGGCTTC CCTGCTTTGT AGACTGCTCA 2340 ATGGTCCCCA AGGCCTACTG GCTTTTACCA CCACTTGAAA ACCTTAGTGT TTTTCCACTG 2400 TCCCCAGAGT CACCTCTTAC ACAGACTTAT TTTGTTTGTC TTTTTCCCCG AGACAGAGTC 2460 TCACTCTATC TGGTAGCATC TTGGTTTAAG CGATCCTCCC ACCTCAGCCT CTGGAGTAGC 2520 AGAGGCACGA GTCACCACAG CCAGCTAATT TCTGTTCTTG GTTTTGTTGT GGTGGTGGTT 2580 GTTTTGTTTT TTAAGAGTTG AAGTTTCACC ATGTTGCCCA GGTTGGTCTC CAACTCCTGG 2640 ACTCAAATAA TCCGCCCTGC CTTGGCCTTC TAAAGTCCTG GGATTACAGG TGTGATCCAT 2700 CACACCTGGC CAGCCCCTGC TTTTCACTAT AGCATTCATG GGAGTTTGCA GGATTTCTGT 2760 GCTGGGGGGA ACGTGTACTC AGCTCATACA GCCAAGTAGA AATTGTACTT GGAACTGGTG 2820 CCGTTGGGTT GTAGACATAA CATGCTTGCT GTTTGTATGG GAAGGGCTTT GCCAGTGCTC 2880 TGTGCCCCTG TGCAGGGCAT CCAGGCCTGC AGGTCAGAAC GGCAGTCTCA CCTATGAGTT 2940 TGTGTAATAC GCAGCAATTC TCCCTGGAAT ATAAGATGGG TGGTCTTGTG AGGTTCCTAC 3000 AAGTAAGAAG ACAAATTTCC CTTCAGTTTG TATTGACAAA ATTCAAAATT AATAATAACA 3060 GCCCAACCTC TTGAATGATA AATGTCCTTT ACATTGACAG ACCAGAACTG CCCTGCTTGC 3120 CTCAGCTCCT CTGTGCAGGT GCAGCTCACA ATTCCCCCCA CACAGGTCAT TTCCTCCCTG 3180 CTTTCTCCAA AAGAGGGAGA CAGCAGTTCT GCAGGACCAC AGGGCTCAAG GCCTTCCAGG 3240 GCCAAAAATC TCAGAAGAAG TTGCCCGTTC TGCCTGTACC TCACGACTGA CCTAGAAATG 3300 GCCTTTGCTA GGAGCAAAGT AGGGGGAAAT GGTCGCCAGA GCTGGGGCCT GGGTACTGGG 3360 CCAGGTTACC CCACAGGAGG GGAAGTACTC AGGGTTAGAG GGGGCCAAGC ACCAAGACCT 3420 CAGCATCCTC AACCTCCAAA AGGACTCAGA GAGATGCAGA AACCGAGACA 3470
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