EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS038-00023

Organism

Homo sapiens

Tissue/cell

ESC_neuron

Coordinate

chr1:1709310-1709720

Target genes

Number: 24
Name	Ensembl ID

RP5	ENSG00000240731
DVL1	ENSG00000107404
MXRA8	ENSG00000162576
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
RP4	ENSG00000224870
MRPL20	ENSG00000242485
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
C1orf86	ENSG00000162585

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_01401	chr1:1708234-1713232	Adrenal_Gland
SE_09353	chr1:1706337-1715519	CD14
SE_24151	chr1:1709019-1713411	Colon_Crypt_2
SE_24972	chr1:1708435-1715328	Colon_Crypt_3
SE_32018	chr1:1708920-1715381	Gastric
SE_41662	chr1:1709212-1711084	LNCaP
SE_50504	chr1:1708166-1715310	Sigmoid_Colon
SE_53732	chr1:1708121-1715326	Spleen
SE_60798	chr1:1706583-1715514	DHL6
SE_62054	chr1:1706412-1732343	Toledo
SE_69065	chr1:1709133-1715317	H9

Enhancer Sequence

CTTTTATTCA TACTTTCCCA CTAGGTTTGG GCCCCTCTAA GCTTTCACGA GTCAAAGACC 60
CCTCCTGCTT GCTGAAACCA CCCACGGAAG GCCGGACACC GAGGACCTGG CCGCCCAAGC 120
AGAGGCGACT GACAAGCGCG GTCCGGGCTG GACGGCCCCA CCTTCCCCGC CCGGGAGAGC 180
CAGGCCGGAC AGCGGCCTCC CTCAGACCCG TCCCCAAGGC CGAGCCTCGC CCTGGGCCGT 240
GCTGGTGCCC CATTCGGGAC GGAGCGGTGG CCCGTCAGCA CTTCCACGGC CTCCTCAGCA 300
GGCCAGATGG GCAGGGCCGG CCTGGTGTCT CCCCGCCTGG CCGCGCGCTC GCGGGCAGCG 360
ATGACCCCAG GCAGCGGGCG ACCCCAGGCG GACGGCAGGC CGGGTCTGCT 410