EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS037-00859

Organism

Homo sapiens

Tissue/cell

ESC

Coordinate

chr1:44000400-44002810

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:44001437-44001458

GATTTCTTTCTTTTTCTCTTT

6.62

dbSUPER

Number of super-enhancer constituents: 22
ID	Coordinate	Tissue/cell

SE_00616	chr1:43998907-44001249	Adipose_Nuclei
SE_04240	chr1:44001629-44002655	Brain_Anterior_Caudate
SE_05040	chr1:44001099-44015486	Brain_Cingulate_Gyrus
SE_05962	chr1:44000439-44020958	Brain_Hippocampus_Middle
SE_08033	chr1:44000708-44003313	Brain_Inferior_Temporal_Lobe
SE_23218	chr1:44000606-44004387	Colon_Crypt_1
SE_23829	chr1:44000860-44001488	Colon_Crypt_2
SE_23829	chr1:44001678-44003757	Colon_Crypt_2
SE_24870	chr1:44000558-44001494	Colon_Crypt_3
SE_24870	chr1:44001732-44003807	Colon_Crypt_3
SE_26649	chr1:43995723-44004223	Esophagus
SE_27645	chr1:43995619-44017587	Fetal_Intestine
SE_28595	chr1:43995607-44004348	Fetal_Intestine_Large
SE_31538	chr1:44000584-44004686	Gastric
SE_41575	chr1:43998859-44001617	LNCaP
SE_41575	chr1:44001646-44015303	LNCaP
SE_47657	chr1:44001705-44003792	Pancreas
SE_50363	chr1:43995694-44004359	Sigmoid_Colon
SE_52524	chr1:44000497-44004238	Small_Intestine
SE_56987	chr1:44002458-44003110	VACO_400
SE_65452	chr1:44000772-44001464	Pancreatic_islets
SE_65452	chr1:44001598-44004611	Pancreatic_islets

Enhancer Sequence

CAAGAGAAGC GAGAGCTGTA TGAGAGACCA TAGAGCTGTG CACCTCGAGA GAAAGTAACC 60
TCCGACAGTG GTGAAGAGCT CGAGTTTTAT ACTGCTAGGA TTGGACTCTG TTTACTAGCA 120
GCGTGACTTT AAGCAAGTGG CTTAACCTCT CTGAATCCGC TTCCTCATTT GTCAAATGAT 180
TATAATAAAA ACCCGTGCCT TATAAGGGTT GTTATGAGGA TTAAAGATAG TATGCATAAA 240
GTGTGTGTAG CACAGGGCTT GGCATCTAGT GAGTACTGTT GTCTGTGTTT GCAGTTACTG 300
TAATCATCCT CAACTGGGAT GGTGTAAACC CACCCTCCCA TCAGGGGTCA CATGAGGTTG 360
CCTTTAATGA GAAGATAGAC TGCTAAGGTT AGGGTCCCTG TCTGCCTAAG GTTGCTGCAA 420
TTCTGAGCTG AGATTAGCAG GTCAAGGAGC TCAACAAAGG GGGTGCCTGC CCCTATTGTT 480
ATCGATGGGA TTGTTTGTGT TGCTCAGGTG TTTGACCTTC AGGTGGGTGG GCTTGAGAAG 540
ACTAGAGGTG AGGCCTGCAG AAGAGACTCC ATGTTTGGGG TAGGTGGAAG GGAATTTTGA 600
GAAGGGGCAG CCTTGGGGTA TTGAGTTCTC CATTTCCTCC CACCCTCCCT GGGCCCTGGG 660
CTTCTACTGA GGCTCTTTCT GCCACCATCT GCCTCTGTGG TCCAGATGCA CCATGTCTCT 720
GTGTGACCGT GACTTCTAGG TCTGAGAACT CTGGTTTTAG CTCCTTAGCA GTATTTTAGC 780
TGCTGTTTCT GGGGACTGTT CCTGGTGCAG CCACAGGGGC ATTCTGGGGG TTGCTCCAGA 840
GGGCAGCTGT GCCTGCATTC CCCTAGGTAT CATCGACTTG CTCCTGACCC ACTGCCGGGC 900
CAGGTTTCAG GCCTGGCAGA TGATGGGGAA CCCTACTGGG GCCAGCCCTG CGTTGGCCCC 960
AAGGGCTTTC TTTCTTGATA TTGGACATGA CTGTGGACTT CACCCCTTCT GAGGCCTTCC 1020
TGGGTGCCAA GCAGTGTGAT TTCTTTCTTT TTCTCTTTGG TTTGAAACAG AATCTCACTC 1080
TGTTGCCCAG GCTGGAGTGT AGTGGTGCAG TCGTGGCTCA CTGCAGCCTC CACCTCCTGG 1140
GCTCAAGTGA TCCTCCCACC TCAGCCTCCT GAGTAACTGA GACTACAGGT GTAGTCCCAC 1200
CTGGCTAATT TTTGTATTTT TTTAGAGACA GGGTTTTGTC ATGTTGTCCA GGCTGCTCTT 1260
GAACTCCTGG CTCAAGTGAT CCACCTGCCT TGGCCTCCCA AAGTGCCGGG ATTACAGGGG 1320
TGAGCCACTG TGACTGGCCA GCAGTGTGAT TTCTAACTTG GGTCCTGAAC CATTCAGGCC 1380
CTTTCTGAGT AGCTTTCTAG TCAACCTTCC AGATGTCAGC TCTGGCTCTG TTCTGGGGGT 1440
GTATCTGGTT GTCCTGGTTG TTCTGGGCTC TGTCCCAGTG TGAGTGTAGA GTGGGTTCTG 1500
GGAGCTGCAG TTGGTGAATC TGAGTCTTTA TTTGGTTGCC TGATAGGTTG TTTTGAGGTC 1560
AGTTTGATCC CAGACTGACG TGGTTCAAAG TTACTGTTTG GCTTTTCTAG GATCCTGCCC 1620
TCATGCTGTT CTGTGTGCCT CAGGGTCTTT GCAAATGTTT AGTCTTCTAA AATGGCCCCT 1680
GGCCACTTTG GGTACACACC TCTTTCCAGG TGTGGCTTCT GCTCCATGTA GGGCCTGTCT 1740
CAGTCTCCAA GCACGAGACC CTGCTGTGGC TGGGTGTGGC AGCAGCGCCT GGCCAGCTTG 1800
GGGGGCCTTT CCCATTACCC AGTTCCCTGC CTTGGACTCT GCCCCTCTGC CCAGGGTCTC 1860
TGCACAATGG TGCAGCCAAA AACCTCACTT GAATACTGTG AGGCCCTGCG GGCATCTCTA 1920
GACAAATGGG CCTTTAAGTT TGGGGCCTGG AAGCTGGTTT GTCTGGCCAG ACCTGCTGGG 1980
CAGCCTGTAT GCTGGGAGCA GCAGCTGCTG GAAACTCAGC TTGGGGAGCG GGGAGGGAAG 2040
CATGCAGAGA GGGCTGCGGG TTCTGGTGCA GGTAGGTGGG GCAGTGGAGG CTGGGTCGCC 2100
AAGCTGGCGA GGGCCATCTT GGGTCAGTTG GGATGGCCTT CAGTCGGTGA GAGTACCCCC 2160
ATATTGGCAG AGGTGGTTAG TGCAACTTGA GGGTAATTCC CAGGTGCAGA GGTGTGTCCT 2220
TGATTTCATG ATGAGGGTCA GTCTTGGGCC GGTGAGGACA TTCCCACGCA CCACCCTCCC 2280
ACTGTGGTTT CTTTGTGTCC GTTATAGGAG GAGCCAAGGT GGCAGAGTGG TGTGGGGTGG 2340
GGATCACTGT GCATGTGGGG GCTTGAGGTG AGAAGCCTGC TGCAAGGTGC AGCTTGCGTC 2400
GAGTAGGCCA 2410