EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS034-20863

Organism

Homo sapiens

Tissue/cell

ECC-1

Coordinate

chr3:49255520-49256810

Target genes

Number: 22
Name	Ensembl ID

RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
MIR425	ENSG00000199032
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
CCDC36	ENSG00000173421
Y	ENSG00000199546
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908
AMT	ENSG00000145020
NICN1	ENSG00000145029

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR2	MA0472.2	chr3:49256669-49256680	ACGCCCACGCT	+	6.02
NFE2L1	MA0089.2	chr3:49256210-49256225	CTTGCTGAGTCATGC	-	7.01
Nfe2l2	MA0150.2	chr3:49256212-49256227	TGCTGAGTCATGCAG	-	7.41

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049217

chr3

49255088

49257141

Enhancer Sequence

CACACTCTCC GCCCTGCTGT CTTGGCTGCT TGAGCTGGCT GCCCCCATGA GCAGCTGCGC 60
AGCTGGCTCT CCCTTCCCTT CAGGGTCAGC AGCTTAACTC TTTCTCTGGG CACAAGCAAG 120
CTGAGGTGTA TCCTGGTTCC CACCTCTCCG TCTGCAAAGA AGGACAGCTC CGGCTCTCTC 180
TCTCTCTTTC TCTGGGTGCC AGCATGCCCA CCATGTCAAG CCATGTTGAG CTGAGCCAAG 240
CCAAGCCCCC AAGAGACCCC TGTACAGTGT CAGCAGGACA GTTAATACCT TTTTTTTTTT 300
TTTTTTTTTT TTTGAGATAG TCTTGCTCTG TTGCCCAGGC TGGAGTGCAG TGGATGCAAT 360
CTTGGCTCAC TGCAGCCTCT GCCTTCTGGG TTCTAGTGAT TCTCTTGCCT CAGACTCCCA 420
AGTAGCAGGG ATTACAAGCA CATGCCACCA CACCCGGCTA ATTTTTGTAT TTTTAGTAGA 480
GATGGGATTT CACCATGTTG GCCAGGCTGA TTTCAAACTC CTGACCTTAT GATCCGCCCA 540
CCTTGGCCTC TCAAAGTGCT GGGATTATAG ACGTGAGCCA CTGCTCTTGG CTGCAGTTAT 600
ACCTTTTTCA GACAATAGTG GCATAGAGCC AAGTATGAAC TTACACAAAC AGGTTATATA 660
ACAAGTGGAG TTATGTGCTT GCATGCCAAA CTTGCTGAGT CATGCAGGCC TGGATATCTG 720
CCTCGGCCTA TTCCTTGACT AAAGCACATC CGTGTACCTT ACAATGACAA AACCCTGTCT 780
CTACAAAAAA TAAAAAAATT AGCTGGGCGT GGTGATGCAT GCCTACTAGG GAGGCTGAGT 840
TGGGAGGATC ACCTGAGCAG AGGTTGCAGT GAGATGGGAT CATGCCATTG CATTCCAGCC 900
TGGGTGACAG AGCAAGATCC TGTCTCAAAA AATGAATAAA TAAAAAATAA GAGGCTCATG 960
CTTGTAATCC CAGCACTTTG GAAGGCTGAG GCGGATGCAT CACTTGAGGT CAGGAGTTTG 1020
AGACCAGCCT GGCCAACATG GTGAAACCCC ATTGTTGGGA ACAGGCCCCC AAGTCTGGCC 1080
ATAAACGGGC CTCAAAACTG GCCAAAAACA AAATCTCCAC AGCAGTGTGA CATGTTCATG 1140
ATGGCCTTGA CGCCCACGCT GAAGGTGGTG GGTTTACCGG AATGAGGGCA AGGAACACCT 1200
CACCCACCCA GGGCAGAAAA CTGCTTAAAG GCAATCCTAA ACCACAACCA ATAGCATGAA 1260
TGATTTGTGC CTTAAGGACA TGTTCCTGCT 1290