Tag | Content |
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EnhancerAtlas ID | HS034-14364 |
Organism | Homo sapiens |
Tissue/cell | ECC-1 |
Coordinate | chr19:3428080-3429100 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:3428465-3428483 | GAAAAGAAGGAAGGAAGA | + | 7.39 | Nr2f6(var.2) | MA0728.1 | chr19:3428275-3428290 | GAGGTCAGGAGTTCA | + | 6.22 | ZBTB18 | MA0698.1 | chr19:3428659-3428672 | AAGCCAGATGTTG | + | 6.13 |
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| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_00856 | chr19:3428174-3429202 | Adrenal_Gland | SE_05799 | chr19:3426090-3431100 | Brain_Hippocampus_Middle | SE_06831 | chr19:3426835-3431011 | Brain_Hippocampus_Middle_150 | SE_26532 | chr19:3428134-3435912 | Esophagus | SE_31377 | chr19:3428126-3430887 | Gastric | SE_38681 | chr19:3427777-3429622 | HUVEC | SE_40606 | chr19:3428061-3431119 | Left_Ventricle | SE_42110 | chr19:3428076-3431089 | Lung | SE_47457 | chr19:3428475-3428874 | Pancreas | SE_48051 | chr19:3427132-3431362 | Psoas_Muscle | SE_48561 | chr19:3428078-3430978 | Right_Atrium | SE_51098 | chr19:3427963-3430622 | Skeletal_Muscle | SE_53320 | chr19:3428000-3430939 | Spleen | SE_65251 | chr19:3427859-3430462 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I003427 | chr19 | 3427600 | 3430997 |
|
Enhancer Sequence | TTGCTTGAAC CCGGGAGACA GAGGTTGCAG TGAGCTGAGA TCGCGCCATT GCACTCTAGC 60 CTGGGCAACA AGAGTAAAAA CTCCGTCTCA AAAAAAAAAA AAAGAAAAGA AAAGAAAAAG 120 AAGGAAGGGG CCAGGGCGCA GTGGCTTACA CCTGTAATCC CAGTACTTTG GGAGGCCGAG 180 TCAGGTGGAT GACCTGAGGT CAGGAGTTCA AGACCAGCCT GGCCAACATG GCGAAACCCC 240 ATCTGTACTA GGAGGACACG GGAGGCTGAC GCAGGAGAAT TGCTTGAACC CAGGAGGAGG 300 CGGAGGTTGC AGTGAGCCGA GATCACGCCA CTGCACTCCA GCCTGGGGGA TAGAGTGAGA 360 CTGTCTCAAA AAAAAAAAAG GAAAGGAAAA GAAGGAAGGA AGAGAAAGCG AGTGGGTGAG 420 GCGTCCTTCT TGGAAGGACC GGAACAGGCA TGCACAGGGA GGCTGGAAGG TTCTCGGAGG 480 TTCACAGGCC TGAGGCCACT CCTCACTGGC CCCCGGTGAC TCCTCCGTCT GTGACCCGGG 540 TCCTCCGCGG CCTCCTGTGA TCCCCAGACG CCTCTCTCCA AGCCAGATGT TGGAGGGAGG 600 TGGGGGCAGC GGCGCTTGGC CTGGTCCCCT GGGGAGCTTG GGCGTCTGGT AGAGGAAATC 660 ACGTCCTCCC AGCTCGCCAG GGAGTCCCCC AGAGATGGAG CTGAGCAGGC GCTGCACAAA 720 CAGGAAACCC CGGTCGGGGG AGGCGGAGGG GGCGTGCTGA CACCAGCTGG CCAGCTGGGT 780 CAGCAGGAAA CGGCTCTGGC CACTTCTCCT GGACACTCGG GGGCCACCGC TCTGTCCTCT 840 TCAGAATGCG TGGCCCTGAA CCTCCCAGCG CGGGGCAGGG TTGGTTCATT GCCTTCACTC 900 AGCAAATGAC TGTAACAGGG GGCCGGGTGC GGTGGCTCAC GCCTGCAATC CCAGCACTTT 960 GGGAGGCTGA AGCGGGAGGA TCGCTTGAGC CCAGGAGTTC AAGACCAGCC TGGGTAATAT 1020
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