EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS034-08966

Organism

Homo sapiens

Tissue/cell

ECC-1

Coordinate

chr14:56023300-56024680

Target genes

Number: 3
Name	Ensembl ID

RP11	ENSG00000213641
KTN1	ENSG00000126777
Y	ENSG00000200742

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr14:56023361-56023372	AAGAGGATTAG	+	6.62
Lhx3	MA0135.1	chr14:56024495-56024508	TAATTAATTATTT	+	6.71
REST	MA0138.2	chr14:56024024-56024045	GCATTTATCCATGGTGCTTAA	-	6.06

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH14I055556

chr14

56023250

56024567

Enhancer Sequence

TCTGTCCCTA TTCTCCCTTC AACCTCCCCC TTGCGTGGAA ATACCTCAAA GTTCCAGATA 60
GAAGAGGATT AGGGGAAGGG GCCAACATCT GCTTGAATTC ACACTGTCTC TTTCACTGAC 120
CCCTGTCTGC CTCTGTTCTT TCTGTGCTGT TCTGGGAGCA TGGGAGCCTC AAGACAGGCT 180
GCCTAAGGAT CAGCACTGGT CAGTGGTTTC TTCTCTGGGG TCTTACTGCC TCCATAATAA 240
GTACAACCAA GAGTGCAAAA GGATTTCCAG ATGACCATGC CAAAGCTTAC CGTAAAGCAA 300
ATGGATCACT GTACATAATG CCCAGAATAT CATAGGCACT CAGTAAGTAT TGATTAAAGG 360
AATAAATAAA TGATCTGAAG TGGTCAATCT AAGCACAATA AGCAGTGAGT GGAAAAATAG 420
CAATAGCAAA CACTCATAGG GCTTTTAATG TGACAGGCAT TGTTCTACAT GCTTTACATA 480
CATTAACTCA TGCAGTCCCC AAAATGACTC TTGGAGGTAT GAAACAGAGC AGAGCTAAAG 540
TAACTTCTCA GGTTGCTGGA AGGCCCCTGT AGTCTGACTC AAGAGCCTGT ATTATATTTA 600
AGCACTAGTT CATATGGCAG CTCAGACATA GACTCAAGGA TGATTTCTAA CTTCGTAGAC 660
AAAGAGCTGG GCCTTAGATG TCCTTAGATA TTGCAAGTTG ACTTCACACA AGGTTTCACC 720
AGCGGCATTT ATCCATGGTG CTTAAGAGCA CTAACAAATT CCAGGCAACA TCCTGGCATG 780
CAGCCAGCCC ACTGGCATTC CTGTCTGGCA CACTTTGCAG GACTGGTCAT GTGAGAAAGA 840
CAGCTAACAG CAACAATTGC TGGGTGATGA ATAGCCAGAA GGAGGGCAGC TTGAAGCATG 900
ACAGGGACAA GGAATGCAAT CAGGAAAGGC TGACCTGGAA CTTGGAGCGG GGGTAAGTTA 960
GGCTGTGATG GATGGAAGGC AGCAGCTGCA TGTACAGCAT GCTGGCAGGC ACAGTCTGAG 1020
AAACACTGCT TAATTTGAAT CGAATGGGCA GCTTAAGAGG CAGAGAGGCA AGCAGTGACC 1080
AAAGCCACAA ACCGAAACAC AAACCTTTCA TTAATCTTTC CAACCATACT CACACTCTTG 1140
GCAACACAAC TTTTCAATGA GTTGAACATA ACTCATTGTT GTTCCGCATC ATTTTTAATT 1200
AATTATTTTA TTTATTTATT TTTGAGACAG AGTCTCGCTC TGTCGCCCAG GCTAGAGTGT 1260
AGTGGCATGA TCTCGGCTCA CTGCAACCTC TGCCTCCCAG GTTCAAGCAA TTCTTCTGCC 1320
TCAGCCTCCT GAGTAGCTGG GACTACAGGC GTTCGCCACC ACGCCTGGCT AATTTTTGTA 1380