EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS034-02031

Organism

Homo sapiens

Tissue/cell

ECC-1

Coordinate

chr1:156469260-156470270

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263

MA0528.1

chr1:156469853-156469874

AGAGGAGGGAGAGGGAGGGAG

7.53

dbSUPER

Number of super-enhancer constituents: 82
ID	Coordinate	Tissue/cell

SE_00337	chr1:156465189-156476309	Adipose_Nuclei
SE_00902	chr1:156465123-156476044	Adrenal_Gland
SE_01624	chr1:156468387-156476109	Aorta
SE_02565	chr1:156469795-156476049	Astrocytes
SE_02937	chr1:156468807-156469775	Bladder
SE_02937	chr1:156469801-156475479	Bladder
SE_03183	chr1:156465551-156470721	Brain_Angular_Gyrus
SE_04141	chr1:156455754-156476291	Brain_Anterior_Caudate
SE_04925	chr1:156442957-156476137	Brain_Cingulate_Gyrus
SE_05851	chr1:156442823-156476598	Brain_Hippocampus_Middle
SE_06826	chr1:156455584-156476327	Brain_Hippocampus_Middle_150
SE_07824	chr1:156444206-156476920	Brain_Inferior_Temporal_Lobe
SE_08791	chr1:156469253-156469634	Brain_Mid_Frontal_Lobe
SE_08791	chr1:156469940-156470645	Brain_Mid_Frontal_Lobe
SE_09328	chr1:156455579-156476984	CD14
SE_10496	chr1:156468612-156471986	CD19_Primary
SE_11165	chr1:156449814-156479014	CD20
SE_12168	chr1:156469839-156476292	CD3
SE_13036	chr1:156468793-156472076	CD34_Primary_RO01480
SE_13485	chr1:156465196-156476191	CD34_Primary_RO01536
SE_14170	chr1:156468402-156476146	CD34_Primary_RO01549
SE_15064	chr1:156468335-156476467	CD4_Memory_Primary_7pool
SE_16164	chr1:156468699-156473244	CD4_Naive_Primary_7pool
SE_16728	chr1:156468726-156472622	CD4_Naive_Primary_8pool
SE_17138	chr1:156468445-156472542	CD4p_CD225int_CD127p_Tmem
SE_17525	chr1:156455508-156476948	CD4p_CD25-_CD45RAp_Naive
SE_18052	chr1:156466294-156476695	CD4p_CD25-_CD45ROp_Memory
SE_18886	chr1:156466624-156476417	CD4p_CD25-_Il17-_PMAstim_Th
SE_19364	chr1:156467906-156476154	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20186	chr1:156466814-156476634	CD56
SE_21124	chr1:156468394-156476159	CD8_Memory_7pool
SE_21730	chr1:156468468-156476440	CD8_Naive_7pool
SE_22205	chr1:156468381-156476957	CD8_Naive_8pool
SE_22473	chr1:156455624-156476936	CD8_primiary
SE_23670	chr1:156468420-156470673	Colon_Crypt_1
SE_24009	chr1:156468521-156470659	Colon_Crypt_2
SE_25163	chr1:156469338-156475883	Colon_Crypt_3
SE_25856	chr1:156465342-156477016	Duodenum_Smooth_Muscle
SE_26648	chr1:156465154-156476164	Esophagus
SE_28187	chr1:156468391-156476221	Fetal_Intestine
SE_29274	chr1:156468218-156476064	Fetal_Intestine_Large
SE_29623	chr1:156457659-156476054	Fetal_Muscle
SE_31030	chr1:156468651-156480271	Fetal_Thymus
SE_31445	chr1:156465385-156476063	Gastric
SE_32703	chr1:156465262-156472841	GM12878
SE_33523	chr1:156465372-156473390	H2171
SE_34669	chr1:156467034-156476478	HeLa
SE_37054	chr1:156464710-156476367	HSMMtube
SE_38176	chr1:156467537-156476177	HUVEC
SE_39310	chr1:156468423-156470654	IMR90
SE_40614	chr1:156456530-156477045	Left_Ventricle
SE_41764	chr1:156468497-156471403	LNCaP
SE_42136	chr1:156456472-156476277	Lung
SE_44813	chr1:156468511-156476032	NHLF
SE_45962	chr1:156465453-156476220	Osteoblasts
SE_46671	chr1:156468431-156470688	Ovary
SE_47855	chr1:156468651-156470639	Pancreas
SE_48054	chr1:156442802-156481304	Psoas_Muscle
SE_48580	chr1:156467911-156476055	Right_Atrium
SE_49466	chr1:156468478-156470678	Right_Ventricle
SE_50090	chr1:156456568-156476106	Sigmoid_Colon
SE_51078	chr1:156456787-156481370	Skeletal_Muscle
SE_51995	chr1:156468480-156469739	Skeletal_Muscle_Myoblast
SE_51995	chr1:156469832-156470695	Skeletal_Muscle_Myoblast
SE_52473	chr1:156465351-156469748	Small_Intestine
SE_52473	chr1:156469779-156476230	Small_Intestine
SE_53429	chr1:156465373-156476196	Spleen
SE_54540	chr1:156458123-156476924	Stomach_Smooth_Muscle
SE_55197	chr1:156469022-156469677	Thymus
SE_55197	chr1:156469792-156476120	Thymus
SE_57194	chr1:156468590-156471295	VACO_400
SE_58979	chr1:156449810-156478804	Ly3
SE_59740	chr1:156457157-156478970	Ly4
SE_60601	chr1:156449917-156475935	DHL6
SE_61299	chr1:156450124-156478621	HBL1
SE_61431	chr1:156449469-156496609	Toledo
SE_62421	chr1:156450235-156479388	Tonsil
SE_63341	chr1:156457704-156475426	NCI-H82
SE_63769	chr1:156468416-156469749	HSMM
SE_63769	chr1:156469818-156476118	HSMM
SE_65297	chr1:156461973-156472274	Pancreatic_islets
SE_68350	chr1:156458923-156476306	TC32

Enhancer Sequence

CTTTCAGGAG GAGTCCTCGG AAGGCTGCTG AGAGGACAGC GTGATTCACT AGGGGGAGGG 60
GGCCCCTTTC CCCATCCCCC TAAGACCCGA ACCTGGTAGG AGAGAAGCTG GCATTGGAGT 120
GGGGGACTAA AAGCATTTTG GTCTCCTTGG CCCATCCTCC CAAAAGCCCC CCCAAACTCC 180
CTAAACCCCC GCTCGCAGCC CAGCTCCGCC TGCCATAGGT GGAAAGGACT AGAGAACTCT 240
TGCCCAGATG TTGAACAGCT GCAAACTTCT GGCCAGGGAG TTCTCCAGTT GGGGTTACTG 300
ACAAACCACA TCAGGGGTCT CGGAAGCGGG GCTAGGAGGT CTCAAGGAAG GGTCCTGCGT 360
GCCCACCTCG TGGCGACTCC GCGTCCCAAC TCCACAGGCA CCCGGCAAAC ACGGGCCCCG 420
GAGACACACA CACTCACACA CCCCAACCCA CTACCCCGGT GTCATCTGAA CAACATCCCC 480
CCTCCCTCCC CCGCTTCCCA AACAGCTGCG GCTCCCCCCG CCTCCACCCT CCCGCCGCCC 540
TCCCAGGCCC CCTTCTGCAC CATTTCGGGC CAAGGAGGAG GGAACAGGCG GCGAGAGGAG 600
GGAGAGGGAG GGAGGGCCGG CTGTTAAAAT GTCAGTCGCT CCCGACTGTC ACCGGAGACC 660
CCCTCGGAGG ATGGCGCCCC GTCCCAGACC GCTCGGAGGC CGTCGTAAAC CCCCTACACG 720
AACAGGCGGG CGCGCCCCCA ATCCGCCCGT CCCCACCCCG TACTCCCAAC ACCCAAGGGA 780
ATTGCAGCCC ACTCCACTTG TCCCCCACGA CAGACTCCCT GACACAAACA GTCCCCTAGG 840
TAATCCCCGC CAACGCCACA CGAAAACACG GCCCGCTTCG CGAGTTCCTC CCGGCCCGGG 900
GGCTGCCCCA TCCCACCCCT CAGGGGGACG GTCTAGACCA CCCTCCACCC CAACCCCTGG 960
ACCGGGTGGG GGAGGGGGCC TCTTAAAGTG GCAGGCGCAT TATTTTTCTC 1010