Tag | Content |
---|
EnhancerAtlas ID | HS034-00736 |
Organism | Homo sapiens |
Tissue/cell | ECC-1 |
Coordinate | chr1:27985840-27987320 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Klf1 | MA0493.1 | chr1:27986627-27986638 | TGGGTGTGGCC | - | 6.62 | SCRT1 | MA0743.1 | chr1:27987174-27987189 | AAGCAACAAGTGTTC | + | 6.03 | ZNF263 | MA0528.1 | chr1:27986240-27986261 | CAAGGAGGGTGAGAGGGAGGG | + | 6.09 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_09188 | chr1:27984869-27988237 | CD14 | SE_10634 | chr1:27984903-27988562 | CD19_Primary | SE_11776 | chr1:27984395-27990384 | CD20 | SE_20299 | chr1:27984718-27990268 | CD56 | SE_25377 | chr1:27984923-27990773 | DND41 | SE_39434 | chr1:27985042-27986364 | Jurkat | SE_39434 | chr1:27986729-27988556 | Jurkat | SE_41048 | chr1:27984782-27987816 | Left_Ventricle | SE_42462 | chr1:27984924-27987820 | Lung | SE_49213 | chr1:27985000-27987630 | Right_Atrium | SE_62470 | chr1:27916580-27996594 | Tonsil | SE_66376 | chr1:27985042-27986364 | Jurkat | SE_66376 | chr1:27986729-27988556 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 27985869 | 27985982 | chr1 | 27986720 | 27987200 | chr1 | 27986111 | 27986384 |
|
Enhancer Sequence | GCTCTTAGCT TGCCACGGAC TCCATGATTC AAGAAGGCCT GGCCCCCAGG ACCCTGGGAC 60 TAGAAAGGCA ATTGACTCAT CCTAGGATGG GGGAAGCCTG GCCCCGGAGG TTAAGTGAAA 120 TTGCTCTAAG ACACAGAGCA CATCAGCGGC AGGATCAGGA AGAAACTAGT AACCCTGGAG 180 CACCTAGCAC CAGCACCCCT AGTGCAGGGT ACTTCATACC TCGCATCATC TAACGCAGGT 240 GTCGCTTCAT TTTACAGATA AGCGGACTAA CGTCCACAAG TCATGGACTC CTGTTCTGGG 300 TCACACAGAG TTAGGGCTAA GAAACCAGGT CTGCAGGCGC CTAGTTTCCC GCAGTTCTTC 360 TGGGTCTGAG TTTGGGGTGG TGGGGAAGAG GCGAGCGTGT CAAGGAGGGT GAGAGGGAGG 420 GTGGGGCTGT GTTTCTGGGA CTTTCCTCGC TGAGGTCAGA GGCACCGAAA TAGACGCGCT 480 GCAGCGAGCG CCCGGAGGCC CGGTCACACC CTGTGCCCGG CCCGCCGCGG GGAGCGGTCC 540 AGCCGCAGCG CACGAGCCCT CCGCCGTCCC ACTGCCCCCC GGAACCGCGC GAGCCTCGCA 600 AACCGCTCGG CGCCCAGTCT CCACCTCGCC GGCTTCATGA ACGTGCCCCG GGAGACCCCG 660 ACGCCCTGAA GCCGGCGCGG CCGCCCCACC GCCCCACCGC CCCACCGCCC CACCGCCGTC 720 TGCGCGAACG CCGGGCCTCC CCCTCCGCCC ATCGCTGCCA CCATCTCTAC TCCGACGGCT 780 GCGGCGGTGG GTGTGGCCAC CGCGCTTGCC AATCAGGAAG TGAGGGCCGG CTCCGGACGC 840 GCCCCGCTGT TACGTCACTC CGACGGCCCC GGATGCCCCG CCCAGTGGCC TTGCCTGGGA 900 AAGGCGACTG GGGCACCGGT GGGTGCGGAC CCTCAAAGGG TGAAAATAAT TCCCGTGTGA 960 ATTGCGCGCA TTATAACTGC TCTAAGAAAT GCAGCCAGGG CATTTTAAAA TGTATTTTTT 1020 CAATCACTCC TCTTCCAGCC ATTTATCCGT CCGTCTGTAT GTATGTCTAT CCAGTCAGCC 1080 AAAGTAATTG GGTGCCTCCT GAGTGCCAGG CGCTGTGCTG GGTTCTAGCT ATAAAGAGAG 1140 ATGAACCCTC TGCTTGTCCT CAGGGAGCTC ATAATCTAGG GCGGAAGCCT GATGGTAACA 1200 AATGCTCATG CCATCGTTTT CATTGCAGTC ATGATTCATT CTGGGACGGT GAGATACAGG 1260 CTGCTGCAAT AACCAGGTGT CTAACTTGGA TTGGGGCTCA GGTCCCTGTA GAAGTTACAT 1320 CGAGCCGACT CCTGAAGCAA CAAGTGTTCC AGGCAGAGGG AAGAGCTTGT GCAAAGGCAA 1380 TGAGGCTAGC AGGCTGGAAA ATAAGGGAAA GGAAACTGAG TGAGATGAGG CTCTGGAGGT 1440 TTACGGGAGC GAATTATTTA AGACCTTGGA GGCCATAGTA 1480
|