Tag | Content |
---|
EnhancerAtlas ID | HS029-07764 |
Organism | Homo sapiens |
Tissue/cell | CUTLL1 |
Coordinate | chr19:18616030-18619090 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:18616238-18616256 | GGCAGGCAGGAAGGCAGG | + | 6.77 | HSF1 | MA0486.2 | chr19:18618282-18618295 | GAAAGTTCTGGAA | - | 6.29 | RARA(var.2) | MA0730.1 | chr19:18618822-18618839 | AGGTCACATACAGGTCA | + | 7.01 |
|
| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_01013 | chr19:18616790-18618942 | Adrenal_Gland | SE_04099 | chr19:18612612-18621162 | Brain_Anterior_Caudate | SE_06012 | chr19:18609083-18619184 | Brain_Hippocampus_Middle | SE_08139 | chr19:18611825-18620707 | Brain_Inferior_Temporal_Lobe | SE_08861 | chr19:18618070-18618386 | Brain_Mid_Frontal_Lobe | SE_12155 | chr19:18614992-18619095 | CD3 | SE_15037 | chr19:18615264-18618963 | CD4_Memory_Primary_7pool | SE_17983 | chr19:18613350-18619260 | CD4p_CD25-_CD45ROp_Memory | SE_19379 | chr19:18612797-18619131 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20439 | chr19:18615273-18618899 | CD56 | SE_21047 | chr19:18616059-18618949 | CD8_Memory_7pool | SE_22689 | chr19:18615399-18619616 | CD8_primiary | SE_23216 | chr19:18612701-18620963 | Colon_Crypt_1 | SE_23893 | chr19:18613414-18617350 | Colon_Crypt_2 | SE_23893 | chr19:18617508-18618912 | Colon_Crypt_2 | SE_26932 | chr19:18616253-18618743 | Esophagus | SE_30600 | chr19:18617865-18619920 | Fetal_Muscle | SE_31681 | chr19:18616275-18619182 | Gastric | SE_41123 | chr19:18609803-18620443 | Left_Ventricle | SE_41560 | chr19:18615472-18620976 | LNCaP | SE_42344 | chr19:18610919-18620435 | Lung | SE_46271 | chr19:18617926-18619177 | Osteoblasts | SE_47511 | chr19:18617763-18618281 | Pancreas | SE_48120 | chr19:18610995-18621599 | Psoas_Muscle | SE_48694 | chr19:18610987-18621062 | Right_Atrium | SE_50125 | chr19:18610975-18620517 | Sigmoid_Colon | SE_51145 | chr19:18609758-18621004 | Skeletal_Muscle | SE_52434 | chr19:18610979-18621003 | Small_Intestine | SE_53541 | chr19:18617401-18619093 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 18616378 | 18616441 | chr19 | 18617449 | 18618539 | chr19 | 18618400 | 18618511 | chr19 | 18616907 | 18617225 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I018498 | chr19 | 18609234 | 18621009 |
|
Enhancer Sequence | GTGTGCTTTC TTCTGCATCT GCCACAGCTC ACCCAACAGC AAATGCAATC CCAACTAGTT 60 AGGCTCTTGT TAGGACTGAA GATAGCTTTT GCTATTCTTC TCTACTCAAT TCTTCATCCT 120 AAGGATGCTG TGGCCAGTCA CACCCTCCCA CGGGCAAGGG CACCCGGCAA TAAGCCCCAG 180 CTACTGCCAT TACTCATCCC ACTTCCCAGG CAGGCAGGAA GGCAGGTGTG CAGAGCACTG 240 GGCAGGGCCA TAGTACCTGT GCCACACACA CACATGCTCT TCACCTCATC CAGAGTTTCC 300 TAGGTTTTGG TGCTTCAACA GCCCTCAGTA ACGCAGGCTC CTTACTATGA GATAGCCTGG 360 GAGAGAGCTG GGGTTTCTGT GATGGGAAAG GGCTAAGCCG GGAAAGGAAA CAGTGTGTGA 420 CTGGCGCCTT GCAAGCCACC TAAGGCACCA GGCACACACA GGGGAGGGGA GAAGAGGACG 480 GGAGAGGAGT GGGGGCCACG GGATGCGGCT TGTGTTCCCC TGATGTCCTG GGACACAGCT 540 CCCTGAACCC CAAAACACCC CACGGACAGG AAAGCAAAGT AAGGAGAGGT GAATGTGAGT 600 TGCAGGAGGG GCTGCAGGCA CTGACCTGAC CTCCCACCCA CAGGATGACC CCACACAGCA 660 GAGGGAGAAA CTGAGGCCCA GAGGGTGGCA CCACTGTACA GTCAGGTACC CCCACCCTGT 720 GTCCTGCTCT GTACTACACA GACCACCCAG CACACATGTG GCCAATACCA GTGAGGCAAA 780 GGTGGCAGCC TGGGCCCCCC ATGCTGGCCC TCAGCCATCC CTGGGACAAC AGTCTAGACA 840 CCCAGAAGCT CTGCACCTAG GCCCACTGAC CCAGCCTCCC TCCAAGCCCT GGGTGCCCAT 900 GTGTGCCCAG GCTGCTGCCC CTGGCACTCA GGCCATGCCA CACGCAGCAG CTGGGTCTGA 960 AGCCTGGCTT GGAACCAGCC CCCCACAGTC AACATGGAGA CAGCCCTGCT GGCACCGCCC 1020 CAGGCCTGGG CCCTGTCTCC CGCACCCTCC AGCGACCTGC CTGGGCCACC CTCAAGGTGC 1080 GCCTGCTCCT AAGCCGCCTC CCACAGTGGA GGGACACCCG GGCTGCTTCA GAGCAGACTG 1140 TGGCAAGTTA CCCTCTCCCC CAGGGGGAAA GGGATCCAAA GCTCCTGTGC CTCTGGGGTG 1200 CAGCATCAGC CCAGACTTCT GCTCGGCTGG GTGCCATGGC TCACGCCTGT AAGCCCAGCA 1260 CATTGGGAGG CCAAGGCAGG AAGTTCGTTT GAGGTCAGGG GTTTGAGACC AGGCTGAGCA 1320 ACACAGGGAG ACTCTGTCTC CATATAAATA AAAAATTAGC CAGGTGTGGT GCCACGCACT 1380 TGTAGTCCCA GCTATTTGGG AGGCTGAGGT AGGAGGATCA CTTGAGCCCG GGAGCCAAGG 1440 CTGCAGTGAG CTATGATCAC ACCACTGCAC CCCAGCCTGG ATGACAGAGC AAGACCTCGT 1500 CTGAAAAAAC AAAAGCAGAC TTCCGTTCAA CAGCATGTGA ACCTCACCTT GCACACCTAG 1560 GAGTTCGTTA CCCTCCTCAG CTCAGAGATT AGAGGGAACT CTCCCCACAG AGATGCTATG 1620 ATCAGAGGGC CAGGGACCCT GTCTCATTGA TCCTACGCTC TACGCCAGAC ATCGCCTCAG 1680 AATCCTTCTC AACACGGCTC CACTTCCTAT CTACAAGGAG CTGGCCTACA AGATGGAAGC 1740 GATTCCTACA TTATGGGGTC ATGTGGCTCC AGGCACATGG CCCTCGACCA GTGGGAGCCT 1800 GTGCACAGGT AAGAGAGCCA GGGCAGCCTG GAGATGAGCT GGACACAGGC TGCCAGCACT 1860 GGCTGTCCCC TCCCACTTGC CAAATCCAGT GTGAGCTGAG CACATTTCAC TGGAACAAGC 1920 AGGCGTCTGA GAGCATCCAA CTCCAAAAAT AGTGCCACCA GGAGAGGAAG GAACACGCTC 1980 TTCTAGCTGC ACCCGCTCCC TGCCCTCAGA TACCTCCCTG CACAGTCTGT GCCTGGCCTG 2040 TGGCAGTTCA AGGGTCACAC CCAACTCTGA AAAGGGAGAG ATAACATCCC CAGATAAGAA 2100 GAGTGAAAAC AGGCCAAGTC TGCTGCCAGA GCCTGGCCAC AGACCCACAG CCCCTTGGCA 2160 GAGAACTGCT CAGGAAGTCC TCCTCTGAGT CTTTCAAGCC ACTGGTATCT AACAAAGAAT 2220 CTAATCTGCA CACGGCACTT GCCCCGAGCT AAGAAAGTTC TGGAAGGGTC TCCTAGGTCT 2280 CCCCAGCCCA AGGTGAGCTT GCTTCTGTGG AGGGAGATGC CTGCCTGCCC ATGTCCACCA 2340 CCACTGCACA CCAAGCCAGT CTGAAGCCAC CATGATCTGG CTGTTGCTGG TTTATGGTGC 2400 ACCTCCCCGC TGCGAAGAAG TGGGCCATGT GAGCGCAGGG GCTTCATCCC TCCTGCTTCT 2460 TACTGGAGAA ACACTCCTGG AGGCAGCCGA ACCCTCACTG GGTGCAATCC CTCTGTGTAG 2520 GAGATTGCAC TGTGTAGGTT GTGCCCCGCC GAACAACCAC GCAGCTGAGG CTCAGCTCAG 2580 AGACTGCATT CAGAGCCCAA CTAGAATCAG ACACAGGTTC TGCGGGCCCC ACTACCCATC 2640 TGGAGGCAGA CGCCTGACCC CCAGCTCCAT CCCCAGAGAT GAGGATGCAG CAGGCTGAGG 2700 CTGACTCCAT GCGGCAGCTG CTCCCAACTC CACAAGGGAC ACACAAGCCA GCCCTTCCCA 2760 TCCAGGCTGC ACATGACTGT GTTTTGTTTC AAAGGTCACA TACAGGTCAC AAATAAAGAG 2820 GCCGGTTCCC ACTGGAGGCT ATGTCAGGAT TGATGCAGTC CCTGAGAAAA ACTCCCGGAA 2880 AACCCAGGGA CTCCCATGCG GGCTGAGAAA CATTTTGAGT TTGCATGAGA TCAAAATAGG 2940 AGTCACAGCT GAGTGTGGTG GCTCACGCCT ATAGCACTTT GGGAGGCCAA GGCGGGAGGA 3000 TCACTTGAGG CCAGGAGTTA ACAGACTGCA GTGAGCTATG ATCACACCAC TCCACTCCAG 3060
|