Tag | Content |
---|
EnhancerAtlas ID | HS029-00517 |
Organism | Homo sapiens |
Tissue/cell | CUTLL1 |
Coordinate | chr1:43813860-43814510 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 | mix-a | MA0621.1 | chr1:43813904-43813915 | ACTAATTAATT | - | 6.62 |
|
| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | SE_31866 | chr1:43813587-43816440 | Gastric | SE_34471 | chr1:43813503-43816544 | HCT-116 | SE_35010 | chr1:43813554-43816263 | HeLa | SE_57439 | chr1:43813955-43815756 | VACO_503 | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I043347 | chr1 | 43813613 | 43816407 |
|
Enhancer Sequence | AAACCAAGCA TTAAATGCTT CTCTGGACTT CCGTGGTGCC TTGCACTAAT TAATTGTTGT 60 GATTATTTAC CTGTTTGGAT GTCTTTCTCA TTAGATATGT AAGAGACGGT GTTTTATTGC 120 TTTCTCCCCA GTGCCTAACC CAATGTTTGG AGTATCACAC AGTTCATAAA TGTTTGCTGC 180 CTTCCTGCTT GTACACATGA TGCTTGTACC CCAGCGCCTA ACGCAAATCT GGCATCCTCT 240 GCAGCATGAG TATTATTTGT GGCATGGTCT GTGTGGCTCT GAATATATCT GTTTCTGGGG 300 GTGTCCATCG CCCGACCTGG AGTTGTGAGA ACACCCGGTA GGGTGTGCGT GTACCGGGAT 360 CCCTGCCGAG GGTGTACCTG GGTGTTGGTG TTAGGATACG TAGCTCTCTG AGGTGAGGTC 420 TGTGTCTCAG GAGGTGGGCC TGGCACGTTT CTCTCGGGCA GAGCGTGATC CCGTTAGGGA 480 GAGGCTCTCG GTTAGGGCGC TCTATCCTGT TGCTGGGAAG CGTGTTTTCT GCCGGTGGGG 540 CTCTTTGTGG GAATCTCCGA CCGCCTGGGG ATTCGGAGCT GCAGGATTTG GGTCAAACAG 600 ACGCTGGGCT ATCGAAGCCC CGACGCCGGG CCACCGCACG CTTCTTTGCT 650
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