| Tag | Content |
|---|
EnhancerAtlas ID | HS028-01765 |
Organism | Homo sapiens |
Tissue/cell | Colo829 |
Coordinate | chr19:54931280-54932450 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX5 | MA0510.2 | chr19:54932264-54932280 | CGTTCCCTTGGCAACC | - | 6.02 | | RFX5 | MA0510.2 | chr19:54932264-54932280 | CGTTCCCTTGGCAACC | + | 6.41 | | ZNF263 | MA0528.1 | chr19:54931513-54931534 | GGGGGAGACAGGGGAGGTGGA | + | 6.07 | | ZNF263 | MA0528.1 | chr19:54932423-54932444 | GATTCCTCTCCCTCCTCCTCC | - | 7.03 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_03534 | chr19:54926765-54931635 | Brain_Angular_Gyrus | | SE_03534 | chr19:54931743-54933853 | Brain_Angular_Gyrus | | SE_04377 | chr19:54926568-54933990 | Brain_Anterior_Caudate | | SE_05139 | chr19:54925733-54934239 | Brain_Cingulate_Gyrus | | SE_06079 | chr19:54925536-54935449 | Brain_Hippocampus_Middle | | SE_07030 | chr19:54925765-54936104 | Brain_Hippocampus_Middle_150 | | SE_08186 | chr19:54926601-54935209 | Brain_Inferior_Temporal_Lobe | | SE_09025 | chr19:54930550-54931545 | Brain_Mid_Frontal_Lobe | | SE_47477 | chr19:54930976-54931625 | Pancreas | | SE_47477 | chr19:54931719-54932932 | Pancreas | | SE_65407 | chr19:54931051-54933049 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I054417 | chr19 | 54928982 | 54933470 |
|
Enhancer Sequence | CAAAGCGAGC TTAGGGGGCT TCCAATGTGA ACACACCAGC TACCAAGAAC GAGCTCTGAG 60
CACAGCCCCC TCCCCGGCAG GGCAGCACCC ACAGGTTACA GACAGCAATC CTCTTCCACA 120
GACGGGGGGT CCCAGAGGGC CAGACGCCTG CCCCGGACCC ACAGCGGGCA AGGGGAGGGA 180
CCTGTAGGGG TGGCCTGTAT TCAGGACGCT TCCTCCTCCG GCTCTCTGGC GTGGGGGGAG 240
ACAGGGGAGG TGGACAAAGG CCCAGTGGGG GAGAGACACG GCCCCAGCCC CCGCAGCCTG 300
GGAACAAGAG GAGCTTTGTA GGACTCTGAA CAATGGGGCG GGGACACTGG GCGTCCGACC 360
CGAGGGATGG GGGTGGAGGC CCAGCCGGGG CTGGGAACCG GGAGGGTGTC AGGCTCCCGC 420
CCCCTCCACT GCGGGACACC GGCCGGGGGC GGGGACGGGA GGGGTCTGGG GCCCCACATT 480
CAGGTCCCAC AATGGAGCTC TGTGTGTCGG TAGGGTGGGG GCGGGGGCAC GGCTTCTCGC 540
CCATCCTCCA GCCTCCCTCC CACATTCCCT TACTTCCCTC CCAGCTGGCC CGACGCTTGG 600
GTCCCGGGTG GGGGAAGGCC GAGAGCTCCA GGCTCAGCGT CCCCCCAGGA GATGGTGGCA 660
GCTGCCCCCC TTGTACCCTT AGGAACCCCC AGGAGGTGGG GGCGGAGAAC GTCTCAGCAC 720
TGAAGGGTTG GCACTGCAGG CCCCAAGGAC CCTAGGGCAC CCTAGGACAG GTGCCAGGAG 780
GGCTGCCTGC CTGGCAAAGG ATGCGGGGGA AGGGTGTGGG GCAGGCAGTC CTAGGGAGGG 840
GAAGACGGCC CATCCCGGAG CTGGGTGTGA CTGGGGTTCT GCTCCAGGGA GGTGCGAGTT 900
AAATCGGGGG CTCCCTCCCC CCCACCACTC CACCCACCAT TAACATCACA ATGACGTCCC 960
TCCGCTGGGG GAGTGAGGCC TTCCCGTTCC CTTGGCAACC GACGGGGGCC AGGCTGAAGT 1020
CGCCCTTTTC CCACGGGCTG GCCCAATGAG GTGGGGCTGA GATGGGAGGG GTGGATAAGA 1080
AGGCGAGGTG GAGGGGATGG GGTGGGAGGG GACGGTGGCC CCCGGGGTCC TGGGACCCGC 1140
TGAGATTCCT CTCCCTCCTC CTCCGCTCAG 1170
|
