Tag | Content |
---|
EnhancerAtlas ID | HS028-00306 |
Organism | Homo sapiens |
Tissue/cell | Colo829 |
Coordinate | chr1:211908250-211909920 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr1:211908550-211908568 | TCTTCCTTCCTTTCTTTG | - | 6.2 | FOS | MA0476.1 | chr1:211909232-211909243 | GATGAGTCACA | - | 6.14 | FOXC1 | MA0032.2 | chr1:211909507-211909518 | ATGTTTACATA | - | 6.32 | JUND | MA0491.1 | chr1:211909232-211909243 | GATGAGTCACA | - | 6.14 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_03592 | chr1:211907578-211913386 | Brain_Angular_Gyrus | SE_04200 | chr1:211903206-211917214 | Brain_Anterior_Caudate | SE_05181 | chr1:211903287-211927825 | Brain_Cingulate_Gyrus | SE_06382 | chr1:211903158-211917316 | Brain_Hippocampus_Middle | SE_06841 | chr1:211903300-211928156 | Brain_Hippocampus_Middle_150 | SE_08224 | chr1:211903188-211917753 | Brain_Inferior_Temporal_Lobe |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I211734 | chr1 | 211907593 | 211910206 |
|
Enhancer Sequence | AGTAGAATAC ACGCTCCAGG AGACCTTGTC TGTTTTGCTC CCTACCGTAT GCCCAGCACC 60 TGGCACAGTG CCTAGCATGC AGTAAGTACT CAGTACATAT TGACTGAAAG GAAGTGGAGA 120 AGGAAGAATA AAATAATAAA GTCCAGGCTC CTTTTCACTC CCGATGATTG GTGATGCCTG 180 TGCAGGAAGC TCCTGCTCCC AGAGAGACCA GAGGGCCACT GCCCACCTTG TCCCTTCACA 240 CAATTATATA CCATTTCAAA CCACCACCAT GGTTCTTTGG CTCCTTCCAG GCAACCTACG 300 TCTTCCTTCC TTTCTTTGTC TCTCTACTGC CCATCTATAC GAGCCTGCAT GTGCCAGGGA 360 GTCAGTGGCC CCATGCTTGG GAAAGACTGC CCGCCCTTGC TTTACGCTTT CTCAGCTTTC 420 CCTCCTTCCC TCTAGGTGCT TCTTGCGTGG TGCAGGAACA AACGTGCCAC CTCCTTCATC 480 TGGCCAGCTC CCCAATCCCG GGCTGTCTGG TCCCCTGCTG TCTGGCTCCT CCCTTCAGGT 540 TCCTGCCAGT CCTCCCAAGA CTTCTTGACA TTTTCTTCTT CCTTTCCTGG GACTCAAATT 600 CCACTCCATC CCCTCCCCTT TTCTTTGTTC TGACCCATAA TAACCTTAAT ACAACCACCA 660 CCACCATAAT GGTAAGGACT AATGTACTCC TGCCTAGGAA GAGGGTGAGT ATTTATTTTG 720 TGCACTAACT CTCAGATGTT CCAGAAAATG TTTCCAGATC TTGTCTCTGC CTCCCGGTCC 780 ACATTAGGCC TGATGAAAGG ATGTGTGCTG TGGAATCAAG GTAGAAAGCT TTTCCCCCCA 840 GTCATTACCC CCCGCATCTC TGCAGCGCTT GACCATCTAG CACGCCCCTG TGTAGAACCA 900 TTCGCATCTA GCGTGACCCT CCTGGGAACC CGGGAGGCAG ACAGGGCAGG CATAATAACC 960 TCCTTTGTCA GATGAGTCAC GAGATGAGTC ACAAGAGGCG ACAGAAAATC AAGGAGTTTG 1020 CCCAAGGCCA CGGAGCTCCG AAGAGCTGGA TCTGCGCATT CCTGGCTCTG AACCAGGATC 1080 AAGTGCCCCT GCAGGCCTGA GACAACCCAC AATCGGCCTG TTTGAGTGTC CAGTTTAGAC 1140 TCCAGACCAA TGGGAGTTTG CCAAGATAAT AAGTTCCACA TAACAAAGCC CACTGTGTGT 1200 GCCACGGGAG AGCGTAGGAG AAGGCACAAC AGCAGCAAAC GGTGGTTATT AAATGTTATG 1260 TTTACATAAA ACTCCATTGG TTAGAAAATT CCATTCTCAG GTGCGATTTC ATTTGATCTC 1320 ATGGCAGCTG ATTATTGTCT CAAGATGTGG AAACTGAGGA AATGTGACCC ATCTGGCTAG 1380 AAAGGAGCTG AGCTGGGGTA TTTCCCTAAG ATTCCTGTTT CCTATGCCTG GATCCTTCCC 1440 CCTCGAAGAC TGATTAATAA CTATGATCAG CTTGCTTCTC TGCTCGAAGA TTCAGGGGTT 1500 CTGGCCTGGG TAGTTTGCCA GCCCATTTCT CAGAACAATG TGGGAGGCAA CAAGGGCCTA 1560 GAAAGTGGTT TCGAGGAAAT GTGGCCAAGA AAGAGGGCCT TGGGGATGGA AGAACTTGGC 1620 AAGGAGATCT GAGCTGGCCT GCTGGATCCA GAGCAGTGTC AGGCAGGCAG 1670
|