| Tag | Content |
|---|
EnhancerAtlas ID | HS028-00018 |
Organism | Homo sapiens |
Tissue/cell | Colo829 |
Coordinate | chr1:12616210-12616960 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NKX2-3 | MA0672.1 | chr1:12616833-12616843 | TTCAAGTGGT | - | 6.02 | | RREB1 | MA0073.1 | chr1:12616473-12616493 | CACCCACCCAACCCCTCCAA | + | 6.07 | | RREB1 | MA0073.1 | chr1:12616469-12616489 | ACCCCACCCACCCAACCCCT | + | 6.7 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_00009 | chr1:12614857-12619344 | Adipose_Nuclei | | SE_01632 | chr1:12611630-12618044 | Aorta | | SE_26610 | chr1:12616140-12618035 | Esophagus | | SE_33994 | chr1:12616140-12617367 | HCC1954 | | SE_37524 | chr1:12615400-12618765 | HSMMtube | | SE_40699 | chr1:12616105-12617489 | Left_Ventricle | | SE_42271 | chr1:12616053-12617397 | Lung | | SE_47179 | chr1:12615224-12618859 | Panc1 | | SE_51223 | chr1:12615725-12618264 | Skeletal_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I012555 | chr1 | 12615632 | 12618061 |
|
Enhancer Sequence | GGACAGGGTT ATTAGTCCCA TCCTATAGAT GAAGAAACTG AGGCTCACAG AGGTTAAGTT 60
AAGGTGAAGG TGAAGCTCCA GGTCCCACAG AGCCAGGATT CGGAATCTCA GCCAGTCATG 120
GCTGGCTCCA AACTCCAGTC TCTTCCCTTC TCCGCAAGCT CCATGGCTCC CAGATAGGCT 180
GGCCAAGTCG GTTTGCAGCC AGTGTGGACA GCAAAGGAGA TTGGCCTGGC ATGGCTGAGA 240
AGGGTGGTCT AGGGCCAGAA CCCCACCCAC CCAACCCCTC CAAGAAGCCC ATTGCCTGAG 300
GAATCCACCG TGGCATCTGG GGGATGTTTA GCCTTCTCTC GTGCCCACAG CCAGGCCCCA 360
GGCTGGGGCT CTGCCCACAG TCCCCTTGTG ACCTTCCCAA GCAGGATCCA GTTACATCAC 420
AGCAGCAGCT CGAAGGAACA AACACAGCTT GTGTCTGCTT CCAACGGCTT ATTTCTCTTG 480
TCTTGTGAAT ACTGAGAAAT GAAAGGAATG ATAAGGATTT GTGGGCTGGA GGGGGGAAGG 540
CAGCCTGGAA AATTCTGCAG TGCTGGCGGA ACTCACCAAG AGGGTGGAGT GAAGTTTTCA 600
AACCAGCTCC AAAGAGGGAG AGATTCAAGT GGTTACATGG AAGGCCCAAG AGGTTTCCTG 660
GCTCCCCCTT GGCAGGTTAA GGGCCCAGCC CTGGGGCAGA TGGTTCCCCT CCCGGTTCTG 720
CTGCGGGCCT CTCTGTGGTC AGGACCCGGA 750
|
