Tag | Content |
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EnhancerAtlas ID | HS024-10399 |
Organism | Homo sapiens |
Tissue/cell | Cerebellum |
Coordinate | chr20:39788790-39791090 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2C2 | MA0504.1 | chr20:39791032-39791047 | ACAGGTCAGAGGTCA | + | 7.58 | NR2F1 | MA0017.2 | chr20:39791038-39791051 | CAGAGGTCATGAG | + | 6.04 | NR2F1 | MA0017.2 | chr20:39789898-39789911 | CCGTTGACCCTTG | - | 6.1 | Nr2f6 | MA0677.1 | chr20:39789895-39789909 | TGACCGTTGACCCT | - | 6.02 | Nr2f6 | MA0677.1 | chr20:39791033-39791047 | CAGGTCAGAGGTCA | + | 6.67 | Rxra | MA0512.2 | chr20:39789895-39789909 | TGACCGTTGACCCT | - | 6.08 | Rxra | MA0512.2 | chr20:39791033-39791047 | CAGGTCAGAGGTCA | + | 6.27 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_03862 | chr20:39788388-39792651 | Brain_Anterior_Caudate | SE_04797 | chr20:39785829-39800113 | Brain_Cingulate_Gyrus | SE_05800 | chr20:39782391-39815181 | Brain_Hippocampus_Middle | SE_06719 | chr20:39788925-39790104 | Brain_Hippocampus_Middle_150 | SE_06719 | chr20:39790480-39791704 | Brain_Hippocampus_Middle_150 | SE_07837 | chr20:39787866-39794699 | Brain_Inferior_Temporal_Lobe | SE_12079 | chr20:39782388-39791357 | CD3 | SE_14765 | chr20:39782561-39792180 | CD4_Memory_Primary_7pool | SE_16082 | chr20:39784727-39790701 | CD4_Naive_Primary_7pool | SE_16848 | chr20:39784829-39789648 | CD4_Naive_Primary_8pool | SE_17438 | chr20:39761987-39799914 | CD4p_CD25-_CD45RAp_Naive | SE_17951 | chr20:39764446-39794466 | CD4p_CD25-_CD45ROp_Memory | SE_18427 | chr20:39764933-39800967 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19319 | chr20:39765038-39794661 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21356 | chr20:39784125-39789832 | CD8_Memory_7pool | SE_21751 | chr20:39784145-39790409 | CD8_Naive_7pool | SE_22189 | chr20:39784104-39792390 | CD8_Naive_8pool | SE_22504 | chr20:39766212-39792291 | CD8_primiary | SE_42359 | chr20:39782607-39789430 | Lung | SE_50546 | chr20:39782720-39789345 | Sigmoid_Colon | SE_52756 | chr20:39782528-39789872 | Small_Intestine | SE_55156 | chr20:39788836-39789348 | Thymus | SE_55156 | chr20:39789519-39790880 | Thymus | SE_63075 | chr20:39764763-39791207 | Tonsil |
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| Number: 2 | ID | Chromosome | Start | End |
GH20I041161 | chr20 | 39790071 | 39791350 | GH20I041145 | chr20 | 39774097 | 39789364 |
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Enhancer Sequence | TCGGTAAGTA CTGAGCTGTG GCTGTAGCCC AGCAGGGTGG GGATGGGCAT CCAGAACCTT 60 AGCCAGGCCT CTAAGTAGCT GCCCGGAGAG CCAGAGGACC CAGGGGACCT TAAGTGGGGC 120 CAGGAGGGTG GGCAGAAGGT TCTGCCACGT GTAGCTTTCT GCACAAAGTC CTCTGGTGGC 180 CTTGGTGTGA GCTGGTGAGA GGAGCCAGCC ACATGCTGTG TGCCCTGCCA CTATGGGCAG 240 AGACTGGATG TGTAGAACTG GCTTTGGGTG TCCTGGAGGT GAGGGTGGCC AGTAGCGTGT 300 GAAGGGTGCC CTGAAACTCT GGCTCTGAGA CCTGGTATGG CAGCCAGAGG GGCCAAGGAG 360 AGAAGGGGGA GCAAAGACCA GATAGTGTGG GTGCTGCACC ATGGTGAGGT CCTTTGACCT 420 GAAAGAAATG GGAAGCCATG GAAGGGTTCT GAGGAGAGGA GTGATGTGAC CTGACTTGGG 480 TTACTCAAGA TCACTCTGCC TGCTGTGTGG AGAGCTCAGT TAGGAGCTGT TTCCACACTC 540 CAGGTGAAAA ATGAGAGGGC TTGGATCATG ATGGTAATGG TAGGAAGTGG CTGGATTTTG 600 GCCATGTTGT ATTTTGAAGA TAGCGCCAGA AAGAATGTCC TTAACAGATT GATTTTGGGG 660 TGTGAGAGGC ATTGAGGATA ATAGTATGCT GTTTGGCTTG AGCAACTGGA AAACAGAGTC 720 ACCATTGACT GAGATGAGAA GATCATGGGA CTAGCCCATT TGGAGGGAAG CTTGGGTTCA 780 GTTCGAGGCA TGTTAAGTTT TCTGATGCCT ATTAGCTGTC CAGGGAGAGA TGTTGAGTAG 840 GCAGGTGGTT AGAGTGAGTT TAGGTACATA CACAGTAGGG GCTACAGATT TTAACTTGGG 900 AGTATGTAGA TAACACTGAA AGCCACAGGG CTGGGTGAGA TCACCTAGGG GGCAAGCAGA 960 CCAAGAAAAG GGCAGGGTCC AGTGGCTGAT CCCAGACCAC CCCCATATTA GAGATTGGAG 1020 GGGTCAGGGA CAACTAGTGC GGTAAGAGGA GAACCCCCAG AGTGTTGAGT TCTGGCAGCC 1080 CAAGGAAGAA GACAGTGGTG AAATCTGACC GTTGACCCTT GGATTTAACA TGGTGAGAAG 1140 AGCGGTGTCA CCCTAGCGGT GAGGGGCTCA AGGGAATGAG AGGGAGCAAG ATGACTCTTG 1200 CAAGGAGTTT TGCTATGGAG GGGAGCAAAG AAGAGGGCAG TAGCTGGAGA GCTAAGCAGG 1260 GGCAAGACAG GTGTTTTTGG TGGAAGAAGT AACAAGCTGT TCGTATGCTG ATGGGAAAGA 1320 GACCACAGAG GGCAAGATCG GTGATGCAGG CAGTTGCAAC CAGAAGGCCT CTGTTTCCTC 1380 ACTGGAAAAC AAGGACCCTG ATAGCACCTA CCTCCTGGGT GACTGAGGAT CAGAGGAGGG 1440 GGCGCCTATA TAGAGCCAGC CCTCCCTCCG CAGTGCTTGA TCCACTCAGT GTGGCGCTCA 1500 GCCCCCTCGG GGAATTTTGG TGCCTCCTCC CAGGCTCTTG GGGCCCAGAG GAGGTGGTCC 1560 CACCCTCCCC TCCCCTCCTT GACACCACCT TCCAGGAGAG AAAGCCCCCC CCTTCCCCCT 1620 TCTTGTCCAT CCTGTTGCCA GGTCCAGCAG TGTCCCCAGC CTCACATCCT GGGCAGGACA 1680 CCCCTGGAGA GCAGGGGCGC TTGTTCTCTC AGTTTCTTTC CTGGAGCCAG GCCCTGTCTA 1740 GCCCCAGGAG GTGCCCAGTT GCCAGTCATT GTATTTGGTG GAGCATGCAC CTCCTCCTTC 1800 CTCCCTCTCA TGGGTTAGTG GGTTCTGAGG ACCAAACTCC CAGCATCCCA GTGGGCAGCA 1860 GGTAGGGACC TGCTGCCATG CTGCCCCCAA CAGGGAAGTT GTGAGTGAGC CCTGCCTTCT 1920 GTCTTGGATA GGCTGACTGC CACCTTGGCA CAGGCCTCAG CAGTGCCGGT AGGAGGGGAG 1980 GCCTGGAGTG TGGTTTTTCT TCCTCCCATG CCTGACCCAC TTTACTGAAT CTGTTCACAT 2040 CTTCCTTGCC AGAATTACAG GTTTTTTTTG TTTGTTTTGT TTTTGTTTTT TTTTTTTTTT 2100 TTTTTGCTCA GATGAGGAAC TGAGGTCCAA AGAAAGGAAG GGACTAACCT CACCCCATGG 2160 GTTCTGATCC AGTCTTGCCC TCAGGCCTCC AGGTTCCCAG AATAGTGTTG TTTACCTGTC 2220 CAGCCCCAGG TGGGCTCGAC CCACAGGTCA GAGGTCATGA GAAGCTGGAT GAGACCACTG 2280 GGGATGTCCC TGTTTTCTCA 2300
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