EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS022-00588

Organism

Homo sapiens

Tissue/cell

CD4+

Coordinate

chr1:53237690-53239340

Target genes

Number: 3
Name	Ensembl ID

RP11	ENSG00000233664
U2	ENSG00000252018
U6	ENSG00000206627

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr1:53237838-53237849	TTTTATTGCTT	-	6.32
Nr2f6(var.2)	MA0728.1	chr1:53238929-53238944	GAGGTCAAGAGTTCA	+	7.64
RARA	MA0729.1	chr1:53238929-53238947	GAGGTCAAGAGTTCAAGA	+	6.45
Zfx	MA0146.2	chr1:53238592-53238606	CCCGCCTCGGCCTC	+	6.01

Enhancer Sequence

TAATAATAAT CTATGTAAAG GGCAAGTCAC GTAGTAGGTC CTGGCTAAAC AATAGGTTGT 60
CTTATGATGA TAATGTTTAG CTATTTTGAA CCATTTACAT ATATGGTTTT TTTGTTTTTG 120
TTTTTGTTTT ATTTTAGTTA AACAATCATT TTATTGCTTG AGTACACAGA CAAATTTATG 180
CGACCAGGGC AGAGGCTGTA GATGATTCAT ATTTCCAACT GGGAGGGAGG ACTCGCTTGG 240
TCTTATAATA TTGAGCCAAA CGGTGAATCT GGCTCTCTAT CAGAATCAGA TGGAATTTAG 300
CATCCTTATC CTTTCTGTTC CTCTCAAGAT GCTTTGAACA GCAACTGCTT TCTTAATTAA 360
ATGGTAGAGA TCTTCAGGAA GATCAGGAGC AAGTCCCTTA GACTTAAGAA TTCTTAAAAT 420
TTTATTGCCT GTCACAAAAC GTACTTGTGC AACACCATGT GATTCTCTCA CGATTACACC 480
GATCTGTGAA GGAGTAAGGC CCTTCTTGGC CAGTTTGTAA ATCTGCTCCT TCACGTCGTC 540
AGATGTCAAC TTCAACCAAG TGGGGAAGCT GCGTCGATAG GGTAAAGCCG ACTGGGACAG 600
GCCCTTCTCA GGAGCACGCA TACGACCCAT GATGGCGGCG ATCAGGCAAC GAAAGGCTTG 660
TTTTTTTTTT TTCTTTTGAG ACGGAGTCTT GCTCTGTCGC CCAGGCTGGA GTGCAGTGGC 720
GCTATCTTGG CTCACTGCAA GCTCTGCCTC CCGGGTTCAC GCCATTCTTC TGCCTCAGTC 780
CCCTGAGTAA CTGGGACTAC AGGCGCCCGC CACCACGCCT GGCTAATTTT TTGTATTTTT 840
AGTAGAGACA GAGTTTCACT GTGTTAGCCA GGATGGTCTC AATCTCCTGA CCTCGTAATC 900
TGCCCGCCTC GGCCTCCCAA AGTGCTGGGA TTATAGGCAT GAGCCACCGC GCCCAGCTAC 960
ATATACTGTT TTTAATGGAT AACTTCAGAG AAACTAAGGA CACCCCTTGT TGAATTGAAT 1020
ACCTAGTGGA AGATCAAGTT TTCTAAGGAG ATCTCTACTG TAGAAATGGT AGAATTTTGC 1080
TTTTCCTAAG ATTTCTCATG CCTAATGGTT TAAATTTAGT TTAACAAACA TCAGTTGGAT 1140
TTGGTAGAGC TTGGGATTCA AAAATGAAAA TGAGGCTGGG TGCAGTGGCT CACACCTATA 1200
ATCCCAACAC TTTGGGAGGC AGAGGTGGGC AGGTCACTTG AGGTCAAGAG TTCAAGACCA 1260
GCTTGGCCAA CATGGTGAAA CCCCGTCTCT ACTAAAAATA CAAAAATTAG CCAGCCATGG 1320
TGGCATGTGC CTGTAGTCCT AGCTACTCAG GAGGCTGAGG CAGGAGAATC ACTTGAATCC 1380
AGGAGGCGGA AGTTGCAGAG AGCCAAGATT GTGCCACTGC ACTCAAGCCT GGGTGACAGC 1440
GTGAGACTCC GTCTCAGAAA AAAAAAAAAA AGAAAATGAT ATAGGATCTG CCTCCAAGGA 1500
GCTTAACCTA ATGGGAGTGG TGATTATATG ATTAGAAATA CATTTTTATA TTTATACCTT 1560
TTATAGATGT ATGCTTTAAA CTATATATAT ATATATATAT ATATATATAT TTTTTTTTTT 1620
TTTTTTTTTT TTTTTTTTTT TTGAGATGGA 1650