EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS020-22546

Organism

Homo sapiens

Tissue/cell

CD34+

Coordinate

chr19:39821350-39823710

Target genes

Number: 17
Name	Ensembl ID

ECH1	ENSG00000104823
MRPS12	ENSG00000128626
LRFN1	ENSG00000128011
GMFG	ENSG00000130755
SAMD4B	ENSG00000179134
AC005239.1	ENSG00000241983
PAF1	ENSG00000006712
MED29	ENSG00000063322
ZFP36	ENSG00000128016
PLEKHG2	ENSG00000090924
RPS16	ENSG00000105193
AC011500.1	ENSG00000213922
SUPT5H	ENSG00000196235
TIMM50	ENSG00000105197
EID2B	ENSG00000176401
EID2	ENSG00000176396
CLC	ENSG00000105205

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr19:39822443-39822456	TAATAATTAATTT	-	6.25
Nr2f6(var.2)	MA0728.1	chr19:39823517-39823532	TGAACTCCTGACCTC	-	6.22
TFAP2A	MA0003.3	chr19:39823053-39823064	CGCCTCAGGCT	+	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_62916

chr19:39810612-39864153

Tonsil

Enhancer Sequence

CTCAGCCCCC CAAGTAGCTG AGATTACAGG GGCGTGCCAC CACATCCAGC TAATGTTTTT 60
TGTGTTTTTT GCAGAGACAG AGTTTCACCA TGTTGCCCAG GCTGGTCTCG AACTCCTGAG 120
CTCAAGTGAT CTGTCCACCT CAGCCTCCCA AAGTGCTGGG ATTACAGGCA TGAGCCACTG 180
CGCCTGGCCT TTTTTTAAAA AATTTTAGTA GAAATGGGGG TCTTGTTATG TTGCCCAGGC 240
TGGTCTTGAA CTCCTGGCCA CAAGCAGTAC TCCCACCTCA GACTCCCAAA GTGCTGAGAT 300
TACAGGTGTG AGCCACTGCG CTCAGCCTGT CTTTTTTAGT TTGCTATTTA AAGTCGTGCT 360
CCCTCGGGCA TGAGGATATG CGCAGGCAGA GTGCAGATGC TCACAGGAAC ACCCTGTAAC 420
TTGTCAGGCA AGGGGTGCCT TCTGGACCCT GACCCTCCCT ACACCAGCAG GAAACCCAAG 480
GACAGCAGCG GTCACTGGGT GGGTGCAGAG AGTGGGTGGC TGAGAACCTG TTCAGGGAGG 540
CAGCCAGGTG GTGGACTGCC TGTGAACCTA GCTCCAAACC CCAGCACATT TGTGTGAAGT 600
CCATTGTCCC ATCTGACTTC ATACAAAACA GAAATTCAAA GATAAAACTA TAAAGAAGGT 660
GACCGTTAAC CCCCATGTGT GAGGCCCCCT CCTGGGTGCG GGGCCCTGTG CAATTATCAT 720
ATGCCCATGA AGCTGGTCCT TGTTGAGTCC TACAGCCTCT AATCCTAGAG ACCCAAAATG 780
AATTCAGTCA AGATGAAAAA TCTTAGCAGA CCAGTTTTCA CAGAAATAGT CAAAGAGCTC 840
TTCCACCAAA AAAAGCACCA GGCTCATGTG ACTTCGCCCA GGATTCTACC TGATAGTTAA 900
AAGTCGAGTC ATTCCTTTAG CAGGGTGCAG TGGCAGTGCC TGTAGTCCCA GTTACTTGGG 960
AGGCTGAGGC AGGAGGATGG CTTGAGCCCA GGAGTTAGAG GCTACAGTGA GCCAGGATCA 1020
CAGCACTGCC CAATAGCCTG GGTGACACAG TGAGACCCTG TCTCTAAAAA TTTTTTTAAT 1080
AAAATAACAA TAATAATAAT TAATTTGTTT GCTACCTAAA GTGTTCCCAA ACATTGAAAA 1140
AGAAGGAAAA TTTCTTTTTT TGTTTTTTTG AGACAGGGTC TTGCTCTGTC ACCCAGGCTG 1200
GAGTACAGGG GTGCTATCTT GGCTCACTTG CAGCCTCAGC TTCCTGAACT CAACTGACCC 1260
CCGACATCAG CCTCCCAAGT AGCTGGAACC ACAGGCACAT GCCACCATGC CTGGCTAATT 1320
TTTTTTTTTT TTAATAGAGA CAAGGTCCTC CACCAGGCGC GGTGGCTCAC GCCTGTAATC 1380
CCAGCACTTT GGGAGGCCGA AGCAGGGATC ACCTGAGGTT AGGAGTTCGA GACCAGCCTG 1440
GCCAACATGT CTCTACTAAA AATACAAAAA TTATCCAGAC ATGGTGGTGG GCCCCTGTAA 1500
TCCCAGCTAC TCAGGAGGCT GAGGCCAGAG AATCGCTTGA ACCCAGGAGG CGGAGGTTGC 1560
AGTGAGTCAA GATCGCGCCA CTGCACTCCA ACCTGGGCAA CAGAGCGAGA CTCTGTCTCT 1620
AACAAAAAAA AAAAAAAAAT AGAGACAAGG TCTTGCTATG TTGCCCAGGC TAGTCTCGAA 1680
CTCCTGGCCT CAGGTGATCC TCCCGCCTCA GGCTCCCAAA GGGCTGAGAT TACAGGTGGG 1740
AGTCATAGTA CCTGGCCAAA ATTTCATTTT TAAAAAATGA TGCCAGCGTA ATGTTGAAAC 1800
AAAAACTCAA CAAAGTTTGT ACAAAAAAAA AAAAAAGACT CTTAAACCGG TATCATAAAT 1860
AATCGGTATA AAATTCTGCA ATAAAATATT GCTATACAAA CAAAAAGTTC TAGAGTATGA 1920
ACTCTTGGCC TCAAACACAG AGATTCTTTT TTTTTTTTTT TTTTTTGAGA TAGAGTCTCG 1980
CTGTGTCACC CAGGCTGGAG TGCAGTGGTG TGATCTCAGC TCACTGCAGC CTCTGCCTGC 2040
CAGGTTCAAG CGATTCTCGT GCCTCAGCCT CCCAAGTAGC TGGGATTACA GTCACATGCC 2100
ACCACGCCCA GTTAATTTTT GTATTTTTAG TAGAGACGGG ATTTCACCAT GTTGGTCAGG 2160
CTAGTCTTGA ACTCCTGACC TCAAGTGATC CACCCTCCTT GACCTCCCAA AGTGCTGGGA 2220
TTACAGGGAT GAGCCACCTC ACTCGGCCAA ACACAGAGAT TCAAAGTCCA TGAATAGGGC 2280
TGGAACTCCA GCAGTCCCTT AGCCTATACC TCCAACATCA CCCCTCCCCT CATGGCCTGA 2340
TCCAACCCTT TCTTCCCCCA 2360