EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS020-00059

Organism

Homo sapiens

Tissue/cell

CD34+

Coordinate

chr1:1890690-1891400

Target genes

Number: 24
Name	Ensembl ID

ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
CCNL2	ENSG00000221978
MRPL20	ENSG00000242485
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
CALML6	ENSG00000169885
TMEM52	ENSG00000178821
RP11	ENSG00000233542
PRKCZ	ENSG00000067606
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
RER1	ENSG00000157916

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:1890776-1890796	CCCCCCTCCACCCACCCCCA	+	6.88
RREB1	MA0073.1	chr1:1891352-1891372	CCACCCACCACCACCTCCCC	+	7.1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I001959

chr1

1890883

1892394

Enhancer Sequence

TTTTGTGTGT TTTGTTTTTT TTTTGGACAG GGTCTGGCTC TGTTGGCCAG GCTGGGGTGC 60
AGTGGCACCT GCTCGATTCA CTGCAACCCC CCTCCACCCA CCCCCACCTG GGGTCCAAGC 120
GATCCTCCCA CCTCAGCCTC TCCACTAGCT GGGATTACAG GCATGCGCCA CCATATCTGG 180
CTAATTGTAT TTTTTGTAGA GACGGGGTCT CGCCATGTTG CCCAGGCTGG TCTTGAACTT 240
CTGGGCTCAA GCGACCCTCC TGCCTTGGCC TCCCAAAGTG CTGGGATTAC AGGCATAAGC 300
CACCACACCC CTCCCTCCTG TAACTTTAGC CTGTTACATG TGCCGTGGCT ACCTGGGCCA 360
GGGCCGCCTG CCACCTGCCC AGCTCGGGTG ACCCCAGGGG AAAGAGTCAG TAGAGGGCAT 420
CTCAGGAGGG CTGGACACTA GCTTCCTGGA ACATCCCAGC CCTCCCGACT TAGACCCGAG 480
AGTGCACGCC CTCGGCCACT AACCCAGAGG AGCTGCGCCG CGGTTCTGCC CAGCATTCAG 540
GAATATGTTG AGTGTATTTT TGGAAGTAAA ATAGCAAAAC AGGGGCCTGC GTGATCCTCA 600
CTGAGAGGCC AAGTGCATCC TTCCCCCATC ATGTTCTGCG CCACCATGCC CGATCACAGG 660
CTCCACCCAC CACCACCTCC CCTTCGAGAG AGAACGGGCC CCTCTGACTC 710