EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS020-00046

Organism

Homo sapiens

Tissue/cell

CD34+

Coordinate

chr1:1599100-1599760

Target genes

Number: 31
Name	Ensembl ID

UBE2J2	ENSG00000160087
ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
DVL1	ENSG00000107404
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
MRPL20	ENSG00000242485
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
AL645728.3	ENSG00000236684
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
C1orf222	ENSG00000142609
RP11	ENSG00000233542
GABRD	ENSG00000187730
PRKCZ	ENSG00000067606
SKI	ENSG00000157933

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:1599510-1599525	TGAACTACTGACCTC	-	6.07
RARA	MA0729.1	chr1:1599507-1599525	TCTTGAACTACTGACCTC	-	6.1

Enhancer Sequence

GCTCCTGCAC TGGACAGCCC AGAAGAGACC ATTCCATTCC TGCAGACAAG ACTAGTCGCA 60
ACGCCCGACT ATTCTAGACA GAAAAGCACT CAATTTCAAA AACCTTCAAA CGCAGAGACT 120
TCTAGTGGAG ATTTCCCTAA ATACCTATTT CACACAGTTT ACGGTTTATT TTACAGTTTC 180
TCATTTGTTT TTCTGTTTTT TTTTTTTTGA GAAGGACTCT CGCTCCCATC CCCCAGGCTG 240
GAGTGCAGTG GTGAGATCTC AACTCACTGT AACCTCCGGC TCCTGGATTC AAGTGATTCT 300
CCTGCCTCAG CCTCCCGAGT AGCTGGGATT ACAGGTGCCC AGCATCACAC CCGGCTAATT 360
TTTGTATTTT TAGTAGAGAT GGGGTTTCAC CATGTTAGCC AGGCTGGTCT TGAACTACTG 420
ACCTCAAGTG ATCCACTTGC CTTGTCCTCT CAAGTGCTGG GATTACAGGC ATGAGCCACT 480
GGGCCCGGCC TATCGTTTGC ATTTCAAACA GCATGGGTAT AAAATAGCCT AGTAATTACA 540
CTGCATAGCC ACACTCATCC CCGTGGAAGA GAATCACATG TGTCCCTTAT AAAAATACCT 600
AGATTTCTGG TCTCCTTTGT AAACAACCTG GACACACTCA ACTCTTGGGA AGTTCCTCTG 660