EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS019-13720

Organism

Homo sapiens

Tissue/cell

CD20+

Coordinate

chr6:42890000-42890760

Target genes

Number: 18
Name	Ensembl ID

C6orf226	ENSG00000221821
CNPY3	ENSG00000137161
RP3	ENSG00000231113
RPL24P4	ENSG00000181524
GNMT	ENSG00000124713
PEX6	ENSG00000124587
PPP2R5D	ENSG00000112640
MEA1	ENSG00000124733
KLHDC3	ENSG00000124702
RRP36	ENSG00000124541
AL136304.1	ENSG00000240625
KLC4	ENSG00000137171
CUL7	ENSG00000044090
MRPL2	ENSG00000112651
PTK7	ENSG00000112655
C6orf108	ENSG00000112667
CRIP3	ENSG00000146215
RP11	ENSG00000219222

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr6:42890652-42890670	GGAAGGATGGATGGATGG	+	6.59
EWSR1-FLI1	MA0149.1	chr6:42890569-42890587	AGATGGAGGGAAGGAAGG	+	6.75
EWSR1-FLI1	MA0149.1	chr6:42890573-42890591	GGAGGGAAGGAAGGGTGG	+	6.75
IRF1	MA0050.2	chr6:42890480-42890501	AAAAAAAAAAAGAAAGAAAGA	-	6.25

Enhancer Sequence

ATTACAAGTA TTTTTTTTAC ACATCTACTG TCTTTCCCAT GGAACTGAGT TCCTTGAGAG 60
CAGGGACAAT GACTTACCCA ATGTTGTATC TCTAGTTCCT GGAACAGAAA GGGGCTCGGA 120
TATCATAGAC AAGTGGATGG AAGGAGAGGT GGGTAGATGG ATAGATAGAC ACATAGATGA 180
AAGGTAGAAA GAATAGATGG AGGTGGCCGG GCATGGTGGC TCACACCTGT AATCCCAGCA 240
CTTTGGGAGG ACGAGGCGGG TGGATCACGA GGTCAGGAGA TCGAGACCAT CCTGGCTAAC 300
ACGTCTCTAC TAAAAATAAA AATAAAAATT AGCCGGGCGC TGTGGCGGGC ACCTGTAGTC 360
CCAGCTACTC AGGAGGCTGA GGCAGGAGAA TGGCATGAAC CCAGGAGGTG GAACTTGCAG 420
TGAGCTGAGA TCGCGCCACT GCACTCTAGC CTGGGCAACA GAGCAAAATT CCATCTCAAA 480
AAAAAAAAAA AGAAAGAAAG AATACATGGA GGATAGATGG CTGATAGAAG AAAGGATGGA 540
TAAACAGGTG AGTGAATGAA AGGATGGGCA GATGGAGGGA AGGAAGGGTG GCTAGATGGG 600
AAAATGCAAG GAGGAATGGA TGAGTGGCTA GAAGGACATG TAGATGGATG GTGGAAGGAT 660
GGATGGATGG AAAGACAGAA ATGTAGAACC CTAGCCTACA ACACAATGCT GGCCTGGGAG 720
GCCAAAAGCT GGTCTAGCAC CCACAGGTAC ATGCTCTCTT 760