EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS019-03493

Organism

Homo sapiens

Tissue/cell

CD20+

Coordinate

chr12:6427590-6427910

Target genes

Number: 26
Name	Ensembl ID

LOC678655	ENSG00000215039
TAPBPL	ENSG00000139192
VAMP1	ENSG00000139190
RP1	ENSG00000256913
NCAPD2	ENSG00000010292
MRPL51	ENSG00000111639
RP5	ENSG00000255966
GAPDH	ENSG00000111640
IFFO1	ENSG00000010295
NOP2	ENSG00000111641
SCARNA11	ENSG00000247853
CHD4	ENSG00000111642
LPAR5	ENSG00000184574
ACRBP	ENSG00000111644
ING4	ENSG00000111653
ZNF384	ENSG00000126746
C12orf53	ENSG00000139200
COPS7A	ENSG00000111652
MLF2	ENSG00000089693
USP5	ENSG00000111667
TPI1	ENSG00000111669
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
PTPN6	ENSG00000111679
EMG1	ENSG00000126749
PHB2	ENSG00000215021

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELK4	MA0076.2	chr12:6427650-6427661	GCCGGAAGTGG	-	6.62
Gabpa	MA0062.2	chr12:6427651-6427662	CCGGAAGTGGG	+	6.02
ZBTB7A	MA0750.2	chr12:6427649-6427662	CGCCGGAAGTGGG	+	6.59

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_24977	chr12:6426424-6427662	Colon_Crypt_3
SE_68781	chr12:6425729-6427944	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I006317

chr12

6426425

6427662

Enhancer Sequence

GGGTGCTGCG GACAGAGTGG AGGGGATGGG GCACGGTGGG AGAAGGTAAG AGGCAGAAAC 60
GCCGGAAGTG GGAGAAGAGG GGTTTGGGGA AGAGGATGTG GTTCTGGCTA AGCCCCAGTC 120
ATTTGTGTGA CCCTGAGCCA GCCACTTTGC CTGCCTGTAA AGTGAGAGAT GTGACCAAAG 180
CGACGCCCCT GGCCACTCCC GCATTTGGGC TCTGCGTGTG TCCCTGTGTG CCTGCGCACC 240
ATGCCTGAGC CTCCTCCCGG ACCAGCCCTG CCCCTGGCTC CAGCTGACCC TGTCTCTTTC 300
CCCTACGCCC CCACCCCCAG 320