EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS019-01126

Organism

Homo sapiens

Tissue/cell

CD20+

Coordinate

chr1:154983490-154984240

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:154984133-154984153

CCCCCAACCACCACACACAC

7.04

dbSUPER

Number of super-enhancer constituents: 44
ID	Coordinate	Tissue/cell

SE_00535	chr1:154968005-154987480	Adipose_Nuclei
SE_01029	chr1:154971412-154987437	Adrenal_Gland
SE_03046	chr1:154983312-154983905	Bladder
SE_03046	chr1:154984052-154984886	Bladder
SE_04371	chr1:154975125-154986197	Brain_Anterior_Caudate
SE_05420	chr1:154975117-154986988	Brain_Cingulate_Gyrus
SE_06112	chr1:154975116-154991667	Brain_Hippocampus_Middle
SE_07136	chr1:154971348-154985701	Brain_Hippocampus_Middle_150
SE_08574	chr1:154982139-154986021	Brain_Inferior_Temporal_Lobe
SE_12314	chr1:154979992-154986177	CD3
SE_14762	chr1:154971157-154987264	CD4_Memory_Primary_7pool
SE_17044	chr1:154979797-154987116	CD4p_CD225int_CD127p_Tmem
SE_17548	chr1:154971096-154992943	CD4p_CD25-_CD45RAp_Naive
SE_17979	chr1:154971185-154991480	CD4p_CD25-_CD45ROp_Memory
SE_18930	chr1:154975194-154992517	CD4p_CD25-_Il17-_PMAstim_Th
SE_19307	chr1:154971380-154987240	CD4p_CD25-_Il17p_PMAstim_Th17
SE_23265	chr1:154975084-154987002	Colon_Crypt_1
SE_23923	chr1:154975083-154985339	Colon_Crypt_2
SE_24954	chr1:154983079-154985424	Colon_Crypt_3
SE_26282	chr1:154975186-154984319	Duodenum_Smooth_Muscle
SE_26626	chr1:154971404-154992820	Esophagus
SE_27977	chr1:154983618-154986325	Fetal_Intestine
SE_29162	chr1:154984039-154986197	Fetal_Intestine_Large
SE_31489	chr1:154971403-154990904	Gastric
SE_32905	chr1:154984101-154985106	H1
SE_33691	chr1:154982048-154986104	H2171
SE_34425	chr1:154983343-154984289	HCT-116
SE_41104	chr1:154983315-154986202	Left_Ventricle
SE_41600	chr1:154972085-154986790	LNCaP
SE_42490	chr1:154975153-154987405	Lung
SE_48331	chr1:154983306-154985524	Psoas_Muscle
SE_48970	chr1:154983462-154986333	Right_Atrium
SE_50133	chr1:154971335-154992744	Sigmoid_Colon
SE_51640	chr1:154983045-154986114	Skeletal_Muscle
SE_52379	chr1:154971308-154992003	Small_Intestine
SE_53597	chr1:154971362-154987092	Spleen
SE_55030	chr1:154983136-154985121	Stomach_Smooth_Muscle
SE_56872	chr1:154984095-154984717	VACO_400
SE_59127	chr1:154971104-154991422	Ly3
SE_60203	chr1:154969567-154991253	Ly4
SE_61653	chr1:154971190-154991278	Toledo
SE_62469	chr1:154971183-154991923	Tonsil
SE_65436	chr1:154971139-154985261	Pancreatic_islets
SE_68767	chr1:154980220-154985610	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I155010

chr1

154982643

154986930

Enhancer Sequence

GGTAGGGGCC TTGGAACCTG GGGAGGGGGG GCTCTGCGTG CCTGTGTCCC AGGCCCATAT 60
CTATTTTCTC TGCTGCTAAT CCTGGTTCCG CCTGCTGCCC CCCACACTAA GCCTCACTCC 120
CCTAATCCCC AGGGTGGGGG AAAGGGGGGT CAGCTTTACT CAGCTGCCCT GTTCAGGGCC 180
TGCTATCCCT GCCCTTCGGC TGGCTCAAGC CAGCAGTGTT GGCCTTCGTG GCCCCCAGCC 240
CTGCACTGGA CCCTGCCTGA GGTCAGCACC CGGAAAGAGT TCCCATCTCC CTTTTCTTTC 300
CAAGACCAGG CCAGTGGCCT CCACCTTTTG GTTTCTTGGT GCTGGACATA CCCTGCCAGG 360
TGCCCTTGAG CACTGAAGGG TAGGTGATAG GCACTCCCAC CTTTACCCCC TCCCAACTTT 420
CTCACCCTGA AGTCTTCCCC CAACCAAGGA CAGGGCAGGC TTGACTCAGG GCCCAGTTTC 480
AAGAGAGCTG CCCACCGGCT TGGCCGGTCT AGCAGGCCTG ACAGTGAGGG GAGCCTGGGG 540
GGGTGGCGGG AAAGAGGGGA GTGATGGGGT GGGGCCCCCA GTTCTTCCCC CTACCAGGCA 600
AACAGACCAA ACAGACCTTG CCCGGTTCCC TGGCACAGCT GCACCCCCAA CCACCACACA 660
CACCCATGCC CACAAGGTCT TAGCAAGAGG GGGCATGCCA GATTGGGTGG GGATGGGCCG 720
CCTTCATGGG GCGTCAGGGG ACTGGGCCCT 750