EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS019-00904

Organism

Homo sapiens

Tissue/cell

CD20+

Coordinate

chr1:111737810-111738530

Target genes

Number: 6
Name	Ensembl ID

CEPT1	ENSG00000134255
DRAM2	ENSG00000156171
CHI3L2	ENSG00000064886
DENND2D	ENSG00000162777
RP11	ENSG00000236040
C1orf88	ENSG00000173947

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs629619

chr1

111738108

hg19

dbSUPER

Number of super-enhancer constituents: 22
ID	Coordinate	Tissue/cell

SE_00548	chr1:111731103-111739856	Adipose_Nuclei
SE_11520	chr1:111707642-111752738	CD20
SE_11981	chr1:111734412-111740334	CD3
SE_14851	chr1:111732908-111748239	CD4_Memory_Primary_7pool
SE_15989	chr1:111736681-111744339	CD4_Naive_Primary_7pool
SE_17180	chr1:111737722-111739314	CD4p_CD225int_CD127p_Tmem
SE_17406	chr1:111727560-111749237	CD4p_CD25-_CD45RAp_Naive
SE_17935	chr1:111728556-111748584	CD4p_CD25-_CD45ROp_Memory
SE_18363	chr1:111727276-111748673	CD4p_CD25-_Il17-_PMAstim_Th
SE_19522	chr1:111734154-111744848	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20205	chr1:111734731-111748565	CD56
SE_21249	chr1:111734884-111744812	CD8_Memory_7pool
SE_21711	chr1:111735057-111739495	CD8_Naive_7pool
SE_22036	chr1:111733937-111748137	CD8_Naive_8pool
SE_22415	chr1:111732656-111748767	CD8_primiary
SE_25351	chr1:111732691-111754239	DND41
SE_32464	chr1:111734374-111749255	GM12878
SE_50246	chr1:111732689-111748417	Sigmoid_Colon
SE_52868	chr1:111732755-111744865	Small_Intestine
SE_53613	chr1:111731924-111739395	Spleen
SE_58401	chr1:111735195-111775083	Ly1
SE_62234	chr1:111732684-111775273	Tonsil

Enhancer Sequence

CACTGGTGTG TTTATTTAAC ATCTGTTCTC CCCACTGGAC TTACAGCTCC AAAAGGTCAG 60
GGACCACATT CATTTTGGTC ACCACTGTAT TCCCAGAAAA TAGTATAGCT TGGCACACAG 120
CAAGCATTAA GCACTTATTT TTTGAGAAAG TGAAAATTTC TAGCCTCTCC CCTTATTTTC 180
CTGTGGGGAA GCCAAGGTTC AAAGGGGCAC ACAGACTATT CAGAGTTCCA GAGGACAGGA 240
CTGGAATTCT TAGAACAGTG TTCTACCTGC TGCCTCAGTG TGCTTGGTGC CTTAAAACGA 300
TAGCATTCCC CTGTGCATGG GTGGAGACTC GGAGGTGGGG ATGGATGATA AGAAATGGAC 360
AGATGGACGC TGTAAGGTAG AGACAGGACA AACAAAGGAG AGTGGAAGGG GGGTAGCGGC 420
AAGTGGCAGT CTGAGGGCTG AGGGAAAAGT CCTTTATAGC ACCAGAAGCC TCAACTTACA 480
TGGTTTATTT ATTATAAATA AAAGTCTTGG TGGCTTGAGC AGTAACTAGG TGCTTGTGGG 540
TATCAAGTTA GAAGGATCAG AAAATCTGGG TTTGATTTCA GCTTTGTCCA TTCTAACCAA 600
GTCCCAGTCC CCATCTGGCT CAGTTTCTCT GTACTTTAAC CTGGTTAATG GAAGAACAGT 660
GGTGAGAGGT GCCACAGATG CCTACCCTCT CCAGCTAGGG AAGGTCTCAC CCATTTTGCT 720