| Tag | Content |
|---|
EnhancerAtlas ID | HS013-00151 |
Organism | Homo sapiens |
Tissue/cell | Calu-3 |
Coordinate | chr20:52740440-52742190 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr20:52741422-52741433 | TTTTATGGCCT | - | 6.02 | | DMRT3 | MA0610.1 | chr20:52741518-52741529 | CTTGATACATT | - | 6.02 | | Nr2f6(var.2) | MA0728.1 | chr20:52741244-52741259 | TGAACTCCTGACCTC | - | 6.22 | | Nr5a2 | MA0505.1 | chr20:52741878-52741893 | GAGTTCAAGGCCAGC | + | 8.25 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_02547 | chr20:52738119-52741134 | Astrocytes | | SE_34280 | chr20:52737325-52742621 | HCT-116 | | SE_36154 | chr20:52737744-52741993 | HMEC | | SE_64506 | chr20:52737913-52741198 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I054121 | chr20 | 52737565 | 52742518 |
|
Enhancer Sequence | TGCCAAAGCC AGTCAGGTAA GGAGACACTG TTGATTTTGT CTCTGCTTCC TGGTGCCAGA 60
GCAGACCAAG CAGGGCTTTG AAGATGTTGA TTAGACGTAA GCCTTGACGA GGAATGTGAC 120
TGTCATTCAA CAGTGTAGGC ACTCAGTAAA TACCCGGGGC ATGAATTCAA GGGAACGCTA 180
CCTTGCAAAA TGGGCCACTC ACTTCAGACA AGTAATTGAA AGAAACATTT AAAAATTCCA 240
AGAGCAGGAA AGATAAAATA ATTGCTTTGG GTTGCTCTTC GGAAGCCTAA TGCAACATAC 300
AGTTAAGTTT TAGACTTCCT GACTATTCTT CACAAATTTC TTTTCTTCAA ACTCATGTTG 360
TTCTTATATC TGAATGTTCT ACTGCATACT CTAATAGATT TGATTTCAAC CACATCCCAC 420
ACAAAATCAT ATTTACACAC ACACACACAC ATACATATAC ACATATGTAT ATGTATGCAG 480
TTGATTATGG ACATAGTTTT CTGCTTTGCA GATACTTTAT TAAACATCTA TTATATGTGA 540
TATTGATATT TCCTTTTCAC ATGTTAGAAA TATTTTGTTT TCCGGTCTCA ACCATTTTTT 600
TTTTTTGAAA CGGAGTCTTG CTCTGTCACC CAGGCTGGAG TGCAGTGGCA CGATCTCGGC 660
TCACTGCAGC CTCTGTCTCC CGGGTTGAAG CGATTCTCCT GCCTCAGTCT CCCAAGTAGC 720
TAGTATTACA GGTGCCCGCT TGGCTAATTT TTTTATTTTA TTTTTATTAG AGATGGAGTT 780
TCATCGTGTT GGCCAGGCTG GTTTTGAACT CCTGACCTCA AGTGATCCGC CCACCTCGGC 840
CTCCCAAAGT GCTAGGATTA CAGGCGTGAG CCACCCCGCC AGGCCAGGTC TTAACCATTT 900
TTGTAGGCCC TGTGAAATTC TGATCCTGAA TTAAATAGCC CTAAGATTGT AGAAATGAAT 960
AACCTTTAAT GGAGTGTATG CTTTTTATGG CCTCATCAAT AAATGAATTT ATTCCTGACG 1020
TTCTTCTAAG GCTAATCACT CCAAAGGATT TCAGAGTTTA TCTACTTGAG GTTATTTACT 1080
TGATACATTG AGGTGGTTCC ATCCTGTAAC TGGTTAAGTG GATAGTGTAC TGTTTGGGGC 1140
TGTTGAAGGG AGGAATGTAG CTTTCATTTT CTAAGCACCG CAAGAGAAAT GGAGAGGAGG 1200
TCCTGTGTGT GCCCTGAGAT CCCGAAAGGG GAATTATGAA CTGCGAGGAG CATGTGCTTC 1260
AAATCGTTTG CAAATTTGGG CCAATGAGAT GCTCTTTAAA ATGTCATCCT CAAAAGAGGG 1320
CATCCCATTC ATGGGTCTCT GTATGAGCAG CCCTAAAAAG CAAAGAGCCA GCATGGTAGC 1380
TCCTGCCTGT AATCCCAGCA CTTGACGAGG CTGAGGTGGG AGGATCGCTT GAGCCCAGGA 1440
GTTCAAGGCC AGCATGGGCA ACATAGTGAG ACCCCATCTC TACACAAAAC TTAAAAATTA 1500
GCAGGGCATG GTGGAGTGCA CCTGTAGTCC CAGCTACCTT AGGAGGCTGA GGCAGGAGGC 1560
TCCCTTGAGC CCAGGAGGTC GAGGCTGCAG TGAGCTGTGA TTGTGCCGCT GCACTCCAGC 1620
CTGGGCAACA CAGCAAGACC TTGTCTCAAA GAAAAAGAGC AGACTTTCAT TTCTAATTGG 1680
AACAAAAGCC CCTCTAAAGG CGCTGACAGC TCCTTGTAGG ACTCCTGGTT GGGTGATGTT 1740
GGAAGACCAG 1750
|
