Tag | Content |
---|
EnhancerAtlas ID | HS013-00007 |
Organism | Homo sapiens |
Tissue/cell | Calu-3 |
Coordinate | chr1:43409200-43410910 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SPI1 | MA0080.4 | chr1:43410014-43410028 | AAAATGAGGAAGTC | + | 6.32 | SPIC | MA0687.1 | chr1:43410349-43410363 | CGAAAGAGGAAGAA | + | 6.08 | SPIC | MA0687.1 | chr1:43410014-43410028 | AAAATGAGGAAGTC | + | 6.68 |
|
| Number of super-enhancer constituents: 47 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43403674-43411142 | Aorta | SE_02447 | chr1:43405569-43410613 | Astrocytes | SE_05390 | chr1:43406422-43410832 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43406287-43411226 | Brain_Hippocampus_Middle | SE_07319 | chr1:43406534-43411143 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43406272-43411134 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43406726-43412417 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43408918-43409642 | CD3 | SE_13825 | chr1:43408814-43412632 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43406292-43410967 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43407577-43412424 | CD56 | SE_20799 | chr1:43405756-43409955 | CD8_Memory_7pool | SE_20799 | chr1:43409957-43412980 | CD8_Memory_7pool | SE_22754 | chr1:43406075-43412634 | CD8_primiary | SE_23189 | chr1:43406366-43410995 | Colon_Crypt_1 | SE_23904 | chr1:43407223-43410890 | Colon_Crypt_2 | SE_25177 | chr1:43406652-43411022 | Colon_Crypt_3 | SE_26580 | chr1:43395721-43413249 | Esophagus | SE_29267 | chr1:43400819-43410293 | Fetal_Intestine_Large | SE_31882 | chr1:43406451-43411068 | Gastric | SE_33837 | chr1:43401475-43412846 | HCC1954 | SE_34353 | chr1:43395339-43412997 | HCT-116 | SE_35049 | chr1:43400682-43411164 | HeLa | SE_36013 | chr1:43405529-43411011 | HMEC | SE_37191 | chr1:43404622-43414101 | HSMMtube | SE_38794 | chr1:43405440-43410875 | HUVEC | SE_39883 | chr1:43405665-43410931 | K562 | SE_41038 | chr1:43405665-43414583 | Left_Ventricle | SE_41620 | chr1:43406373-43411014 | LNCaP | SE_42796 | chr1:43405575-43411121 | Lung | SE_49782 | chr1:43407568-43410944 | Right_Ventricle | SE_50202 | chr1:43406339-43411463 | Sigmoid_Colon | SE_54088 | chr1:43408884-43411067 | Spleen | SE_55340 | chr1:43407386-43410138 | Thymus | SE_55340 | chr1:43410345-43410828 | Thymus | SE_55821 | chr1:43405505-43410178 | u87 | SE_57045 | chr1:43406294-43410932 | VACO_400 | SE_57417 | chr1:43405825-43410963 | VACO_503 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43405747-43410036 | HSMM | SE_64340 | chr1:43405657-43411071 | NHEK | SE_67781 | chr1:43405505-43410178 | u87 | SE_68708 | chr1:43406265-43410984 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
|
Enhancer Sequence | TTCCTGGGGA GAGAGGGGAA GTATGATCTT CTCTCTCTGT AGCCAGGTCT CAGAGAGGGA 60 GAGGCTTTGG ATTCTTGGGG GTCTCATTTC CCTGGTGGAG CCATGCCTAG GGTCTGGTGG 120 TTCTAGACTC TCTGACTGGG AGGCCCAGGA ACCAGCCCTC CTATGCGAGG GGGCCCAAAT 180 TACTTGGTAG GAATAGCACA GATATAGATA GGAGAAGCAC CCTGGATTTG GAGCTGAAGC 240 CGCTGGCTTC TGATTCCAGC CCATCTGCCT GTTTGCTCTG TGAATTCCAG CAGGCTAAGT 300 CCCCCATGTA CCACCTCTCC CCTATCCTCC ATTTGCTTGT CAGCAAAATG GCAACAGCTT 360 CGTTTGTCAC ATTGGAGATG TGATCCCACC TTGCCCTACC CTTCCTGCTG TTCACAGGGC 420 AGGAAACTGA GCCCTGAGAG GGTGAGGCAA GTTCCAGATC ACTCAGGAGC CTGCAGCAGA 480 GCTCAGGGCT CCGGACTCCT TACCCAGTGC TCCTCACGGC AATAATCCCC AAACCATAAG 540 CCTCCCAAGG TTATATGGAC ATAGACGACA TGCTAGGCGG GAATGCACTT TGGAAAAGTG 600 CACAAGGTGA GTAAGAGTGT GGGGCTAAGG TGTTTCCAAT GGGCAAAGGG ATGGGAGAGA 660 AAAAGAGCAG TTTGCTTCTG TCCATTGGAA GCCGAGGACC TAAGGCAGCA GGAAGGGCAG 720 AGGCCAGCAG GTGAAGAGCC CTGCTTAGCC ACAGGTGACT GAGAGGCCAG CAGGGTGTCA 780 GCCCTGCTGA AGAAAAGTGC TCTTTTCAGC TATAAAAATG AGGAAGTCAG GAAATGTGAC 840 ATTAGGCAGG CCTTTAACTG ATTGTGGGAG AACAGGGCTG CGGGAGGCAT GCCAAAGAAA 900 CGACTGGCAT TCACTACGCA CACTATACCA AGCTGGGCCC TGGAAGTGGG TGGAGCTGGC 960 CATGGCCTGG CTGTGGGTCT CTGGGCCTTG GTTTCCACAG AACCCAGAAG CAGCCTTTAC 1020 TTCAAGATCA TCACAGATAG CCCTGGGCAT AGCTGTTACC AGGCATATTC CCAGTATGGT 1080 CTTTTCATTC TCTGAAAGCG TCAGTCAGGG CAACGACTGC AAAAGCCAAG GCTCTCACAT 1140 CAGAGGCTGC GAAAGAGGAA GAAGGCTTCG GCCCAGGAGG AGTGTGCAGC TCAGAGCCCC 1200 CTCTGTGTGT GCGCTGCATC CTTCCTTCCC ATTAGTCTGT CTACCTGACC CCTTAGCCTG 1260 CCTCTGGACA TTTATTCCAC ATGCTGGGGC TTCCCTCATA CCACAGGGAC TCCATTCCCT 1320 CTAAATCCTC TGCATTGCCC AACTAGAAAG ACAGCCCCCA CCCCCCGTAT GTCCTGGCAC 1380 TGCCCCCAGA ATCTCCCTTC TCTCAATTCT CTGGGGAGCC TTCAGGCCCA GAGCTGTTGT 1440 TCCGAGTGGG TAGTGAGCAG CTGACAAATT TCTGGGGGAC CCCAGCGACA CACCAGGTCA 1500 AGCCTAATTC ATAGGGTGGA CACTAATTCA GAGGCTGTGG CAAGGCACTA AGCATCACCA 1560 GGAGGGCTCA CTAAACAGCG ACTGCTAGGC CCGCCACGTG CTGGGCTTTC TGCCTGCGGT 1620 ATTACCTGCA TTTGCTCATG GGATGCAAAG TATATACTGT ATTTTTCTGG AACACATTAG 1680 AATAGATTAA AAAACAAGCA ATGCAGTGAC 1710
|