EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-26352

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr9:139257580-139257930

Target genes

Number: 32
Name	Ensembl ID

RP11	ENSG00000238058
UBAC1	ENSG00000130560
DNLZ	ENSG00000213221
CARD9	ENSG00000187796
SNAPC4	ENSG00000165684
SDCCAG3	ENSG00000165689
PMPCA	ENSG00000165688
INPP5E	ENSG00000148384
SEC16A	ENSG00000148396
C9orf163	ENSG00000196366
NOTCH1	ENSG00000148400
EGFL7	ENSG00000172889
AGPAT2	ENSG00000169692
AL590226.1	ENSG00000221693
FAM69B	ENSG00000165716
SNORA17	ENSG00000212487
SNHG7	ENSG00000233016
LCN10	ENSG00000187922
TMEM141	ENSG00000244187
C9orf86	ENSG00000196642
NCLP1	ENSG00000213212
PHPT1	ENSG00000054148
EDF1	ENSG00000107223
TRAF2	ENSG00000127191
FBXW5	ENSG00000159069
C9orf142	ENSG00000148362
SAPCD2	ENSG00000186193
DPP7	ENSG00000176978
SSNA1	ENSG00000176101
TMEM203	ENSG00000187713
TUBB4B	ENSG00000188229
COBRA1	ENSG00000188986

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr9:139257687-139257698	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr9:139257687-139257697	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr9:139257743-139257753	GCCCCGCCCC	+	6.02
SP3	MA0746.2	chr9:139257617-139257630	CGCCACGCCCCTC	+	6.18

Enhancer Sequence

CTGGCTGGGA CAGGGTAGCT GGTGAGGCTG TGAGGGCCGC CACGCCCCTC CCGGGAAGAC 60
CCGCCCCTCT AGGGGTAGCT CCAGCCACCT CACCCTCTCC AGAGAAGGCC CCGCCCCCGA 120
GGGATAGCTC CACCCACCCC CAACCTCGCC CTCTCCCGGG AAGGCCCCGC CCCAGGGACG 180
GCTCCACCCC TCCTCATGGT CCGCCTCCGC TCCCTCCCAG AAGCCCCAAG GGGTGGCTCC 240
ACTCCTTCCT GTGACTTGAC CACGCCGCCT CCCGGATCCC CGGCGGGCCG CTTCTCCCCG 300
CAGGCCGTGT AGCGTCAGAT ACGGGTCTGT CCCCGGTTCC GTCCCGCCGC 350