Tag | Content |
---|
EnhancerAtlas ID | HS012-22792 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr8:27219120-27220780 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA(var.2) | MA0072.1 | chr8:27219169-27219183 | TAAAATTAGGTCAT | + | 6.06 |
|
| Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
SE_08208 | chr8:27218876-27220303 | Brain_Inferior_Temporal_Lobe | SE_09156 | chr8:27216720-27239058 | CD14 | SE_10267 | chr8:27216807-27227080 | CD19_Primary | SE_10868 | chr8:27181046-27285079 | CD20 | SE_12034 | chr8:27217227-27222204 | CD3 | SE_13758 | chr8:27218532-27227087 | CD34_Primary_RO01536 | SE_14795 | chr8:27217610-27222557 | CD4_Memory_Primary_7pool | SE_16778 | chr8:27218837-27221619 | CD4_Naive_Primary_8pool | SE_17600 | chr8:27217455-27229236 | CD4p_CD25-_CD45RAp_Naive | SE_18325 | chr8:27216741-27229078 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19392 | chr8:27216824-27222187 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20066 | chr8:27216778-27230915 | CD56 | SE_21397 | chr8:27217312-27222271 | CD8_Memory_7pool | SE_22414 | chr8:27216753-27229136 | CD8_primiary | SE_27921 | chr8:27218674-27221105 | Fetal_Intestine | SE_28623 | chr8:27217934-27222042 | Fetal_Intestine_Large | SE_31168 | chr8:27218925-27226604 | Fetal_Thymus | SE_32488 | chr8:27216612-27229104 | GM12878 | SE_40108 | chr8:27217492-27224812 | K562 | SE_41696 | chr8:27218982-27220305 | LNCaP | SE_43522 | chr8:27216759-27225361 | MM1S | SE_50221 | chr8:27218813-27227034 | Sigmoid_Colon | SE_52630 | chr8:27218810-27227024 | Small_Intestine | SE_53591 | chr8:27218861-27222787 | Spleen | SE_55148 | chr8:27219032-27220487 | Thymus | SE_55148 | chr8:27220567-27220878 | Thymus | SE_59882 | chr8:27206325-27247753 | Ly4 | SE_60867 | chr8:27217627-27263346 | DHL6 | SE_62276 | chr8:27181124-27271753 | Tonsil | SE_67171 | chr8:27216759-27225361 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr8 | 27219196 | 27220432 | chr8 | 27219305 | 27219672 | chr8 | 27219743 | 27220043 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH08I027359 | chr8 | 27216947 | 27230373 |
|
Enhancer Sequence | AGGGAGGGAC CTTGGATAGG GGGCTTATGG GCTCCAGGCA CCTTCTCTGT AAAATTAGGT 60 CATACTAAGG GAGCTGGAGG GCCCTTCTCT TTCTGGTATC CCAGGTGGTC TCCCCAGGGG 120 TGGTGGTTGT GGCTGAGGCC CACTGCCTGC TTTTCTGGTG CTCTCAATGA AGTACAGTCC 180 TGGGGTCCTC TGTATGTGGA TGGACTAGGC TGTGAAGTCT ATCCGCCCCC CTGCTCCGCT 240 CCACACCCAC ACACTGCTCT TCACTGATAA CCCCGATGAT GCAGACAGCC TCCCTCAGGA 300 ATTTTTCTCA TCCTCCTAGT CATCATTTCA GTCAGCCCTG CCCCGTGTGC CAGACAAGCA 360 CACTCTATGT GTTCAAAGGT GATGCACCGA TCGTGCCCTG TCTGATGTTT ACTAACCAAC 420 CTGACTGGGT CTGTGGGTGA CAAGGGCAGG CCCTGTTTCC CTTGGATCTT CCTTTTATGG 480 ACACAAATCG CTGACCTGTC TGGGCAGGCC TGCTCTAATC CAGGTCTGGC CCTGAGCCTC 540 CTGTCATTTT GCTGACCCAG TTCATCATCC TGGAGGCAGG GCTTGAGTTG AAAAGTTAGA 600 GCCTCAGGGC AGCACCAGGA GCCTGCACTT TCCGGGGCCT CCCCTTCTCT CTCCCCTAGG 660 CTGACCTGTC CTCCCCTCTC CACTTCCTGG GCGTGACTCA CAGGCAGGCC CTATCGGCAT 720 GGCAGGTATG TGTCATTTCC TTATGCTGGT GAGACCCAGA GTTTCAGTGT TAGCACCCCC 780 ACACTGTGGC TCTTCTAGCC CAATGGAGAA GGGCTAAGGG TTTCTAAAGT CGTTGACCTA 840 GGGATTTACT GTTGGGATGA ATTTCTCACC TAGGGGAGGT GTTCTGTTTT TGCTGAGAGA 900 TGACTGTGGG GAGCAGGGTT CTCTGCTCCT CTGACACTAC TCATCCTCCT TCCCAACACC 960 TGTGGGCCTT TAGCAAAGCA ACACCCCACC CCCACCTTCA CCCTGACCCC AGCAGTGTTT 1020 TCTTTCCCCC CACCAAGACT TCCTTGGGGC CCTCTGGCCT TGCCAAACCC CCTTTGTAGC 1080 AGCCTCCCCT TCCAGCAGTG ACAGGAGGGA CCCAGCCTCG GGAGCCTGTC TCTGAGAGAC 1140 AGATGCAGGC AAAGAGCCGT TACCATGCAA AATCTAGAAC TGTTCCCACG TGAAATCTAG 1200 AACTTCTCCC ACACGAAATC TAGAACTGCT CCCACACGAA ATCTAGAACT GCTCCCATGC 1260 GAAATCTAGA ACCACTCCCA TGCGAAATCT TGAACCGCTG GGTGGAAATG AGGTTCAGTA 1320 GGTGCGGCAG TGTCACCTCT CTGGAGCATC TTCCCAAGTC TTTATGACAA ACAGGGATAC 1380 CCTCATGGCC AGAGTCAGCT GGGAATTTTT GTGGAAGCAG CTCCTTGGAT AGCATCACTC 1440 CTGTTCTCGT CATGGTGGAA AATGACTAAA AACTCAGGAT ATCCCACTGG CCCTGGGCAA 1500 ATTCCCTCAT TGGAGTAGGG ACTAGGACAA GGGCCAGCCC ATCCTGTCAG GCCAGAGCAC 1560 TTCTGTGGTC TTCAGCCCAG TTCTGAGGGC CCCTCTTGAA CCAGCTTTTG GGAAGCTTTG 1620 AGGGAGAGAG GGGAGCCAGA GAGGACGTCT CGTGAGAAGT 1660
|