Tag | Content |
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EnhancerAtlas ID | HS012-19671 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr5:39198110-39198780 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr5:39198325-39198342 | AGGTAAAGCGAAGGTCA | + | 6.43 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_14412 | chr5:39192489-39219407 | CD4_Memory_Primary_7pool | SE_15414 | chr5:39196230-39199121 | CD4_Memory_Primary_8pool | SE_15892 | chr5:39196270-39203571 | CD4_Naive_Primary_7pool | SE_16346 | chr5:39197066-39199165 | CD4_Naive_Primary_8pool | SE_16895 | chr5:39196421-39198858 | CD4p_CD225int_CD127p_Tmem | SE_17328 | chr5:39173104-39220299 | CD4p_CD25-_CD45RAp_Naive | SE_17813 | chr5:39173548-39219105 | CD4p_CD25-_CD45ROp_Memory | SE_18256 | chr5:39172736-39219491 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19181 | chr5:39185733-39198736 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20261 | chr5:39197253-39198553 | CD56 | SE_20261 | chr5:39198671-39206119 | CD56 | SE_21959 | chr5:39185737-39219604 | CD8_Naive_8pool | SE_22332 | chr5:39173005-39220330 | CD8_primiary | SE_30970 | chr5:39197241-39198732 | Fetal_Thymus | SE_39419 | chr5:39196528-39198769 | Jurkat | SE_62247 | chr5:39149212-39220084 | Tonsil | SE_66258 | chr5:39196528-39198769 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | TATAAGATGA TCAGAATATC ATGGGGCTGG TGATAAAATT TTAATGCTAA TAAAAGTAAT 60 AAAATTATAG ACAATGCTCA CTTATTTTGA TACTATTATA TGTCAAATTC TGTATTAAGC 120 ACTTACAACG AATCTCATGT AGTGATTATA ATGTGCTGGC GAAGTAGGTG GTATTATACT 180 CGTTTTTTCA AATGAAGAAA GACATACACG GAAAGAGGTA AAGCGAAGGT CACATAGCTA 240 GTACATTAGT CATGCTTAAA CCCCAGGTCC ACTGACTTTG AAGTCTACAT TATATGGCAA 300 ACAACTCTCA TGCTAGGCTC TGTACCATTA ATAACATTAC TAATAGATAA CCTGGCAACT 360 CTGCACATTG GTTTAAAATG GGTTCATTAA ACTGCTGTAT CTAATTCATG GGACATTATA 420 AGTAATAAAA GACATAAACA TTTTGAAAGT CCTTTGAAAA AAGTTAAAAT CCCATGTACA 480 TATTAGTAAT AATATGTATA CATACACAGA TGGTGCCCTA TTTATGACAG TTCAAATTAA 540 TGATTACTTG ACTTTATGAT GGTACAAAAG CAATATGCAT TCAGTAGAAA CCATGGTACA 600 GTATTCAATA AATTACATGA GATAGTCAAC ACTTTATTAT AAAATAGGCT TTGTGTGAGA 660 TGATTTTGCC 670
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