EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-18777

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr3:183685560-183686040

Target genes

Number: 18
Name	Ensembl ID

PARL	ENSG00000175193
ABCC5	ENSG00000223882
EEF1A1P8	ENSG00000223529
HTR3D	ENSG00000186090
HTR3C	ENSG00000178084
HSP90AA5P	ENSG00000205955
RP11	ENSG00000228205
DVL3	ENSG00000161202
AP2M1	ENSG00000161203
ABCF3	ENSG00000161204
MIR1224	ENSG00000221120
ALG3	ENSG00000214160
ECE2	ENSG00000145194
PSMD2	ENSG00000175166
EIF4G1	ENSG00000114867
CLCN2	ENSG00000114859
POLR2H	ENSG00000163882
CHRD	ENSG00000090539

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MAFF	MA0495.3	chr3:183685664-183685679	CTGATGACTCAGCAG	-	6.16
MAFF	MA0495.3	chr3:183685664-183685679	CTGATGACTCAGCAG	+	6.1
NFE2L1	MA0089.2	chr3:183685665-183685680	TGATGACTCAGCAGG	+	6.54
Nfe2l2	MA0150.2	chr3:183685663-183685678	CCTGATGACTCAGCA	+	6.36

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I183967

chr3

183685621

183685770

Enhancer Sequence

AAGGCACACA GAGAGGAGGG TCATTTAGAG ACTACTAACC ACTCATCGCT AAGGACTTGA 60
GGAAAAACAC ATTAACTGTA GTCTACCCAT ACAGAACTGT CACCCTGATG ACTCAGCAGG 120
CCACTTACCT GTTTTCTCAC TCATTAGCTG CCTATCTCAT GGGTTTCTGT GGAGACACCT 180
GAGATAACAG GAATGGAAGC CCTTTGGGGA AAGTAAATAT GCCGCACACA TTCCAGTATC 240
CCACCGTCAT TCTTAGGCCC AGCCTCTTTC CTATTCTGCT GCTAACCCAT GTTCTTCATT 300
TACTTGTTTT TGTCATTTTT TAGAAGACAG GGTAGGGCTT TTAAAAATCA TTTTATTATT 360
ATTATTATTA TTTTGAGATG GAGTCTTGCT CTGTCAACCA GGCTGGAGTA CAGTGGTGCG 420
ATCTTGGCTC ACTGCAGCTT CCGCTTCCGG GTTCAAGCAA TTCTCCTGTT GGGGTTACAG 480