| Tag | Content |
|---|
EnhancerAtlas ID | HS012-17118 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr20:350400-351270 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr20:350737-350758 | TGTTTCTTTCTTTTTTTTTTT | + | 6.2 | | MEF2A | MA0052.3 | chr20:351171-351183 | TCTATAAATAGC | + | 6.37 | | MEF2B | MA0660.1 | chr20:351171-351183 | TCTATAAATAGC | + | 6.27 | | MEF2C | MA0497.1 | chr20:351169-351184 | ATTCTATAAATAGCA | + | 6.02 | | SPIC | MA0687.1 | chr20:350657-350671 | TACTTACTCTTTTT | - | 6.52 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_15234 | chr20:349357-357936 | CD4_Memory_Primary_7pool | | SE_21243 | chr20:349857-354719 | CD8_Memory_7pool | | SE_34190 | chr20:350231-354605 | HCC1954 | | SE_35196 | chr20:349088-355405 | HeLa | | SE_39865 | chr20:350235-356875 | K562 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I000368 | chr20 | 349178 | 357150 |
|
Enhancer Sequence | CCTCCAAAGC TCCAGATTAT CTGAACCCCC TTTACCTCTC TGACCTCATC TCCCACCGCC 60
TCCCTGTCAC TGGCTGCACT CCAGCCACAT TGACCTTCTC CGATGGCACA CCAGTCAGCT 120
AGTCAGCTTC CTTTTGGAGC TTTTGCATGA GCTGTTCCTC TTCCTGAAGA ATTTGCCCTT 180
CGGATAGTCT CAGGGCATCC ACTGAACACT CCACTCAATA CAGCCACTGC CTGCCCACCC 240
AACACTCCTC ATCTCTGTAC TTACTCTTTT TTTCCCTTGC ATTCGTCACC CCCTAACATG 300
TGCTACAATG TACTTATTAT GGTAATTATT TCTTGCATGT TTCTTTCTTT TTTTTTTTGA 360
GACAGGGTCT CACTCTGTTG CCCAGTCTGG AGTGCAGCAG CATGATCTCA GCTCACTGAA 420
ATCTTGGCCT ACCTGGCTCA GGCCATCCTC CCTCCTCTGC CTCCTGAGTA GCTGGGACTA 480
CAGGCACTCA CCACCATGCC TGGCTAGTTG TTGTACTTTT TTGTAGAGAT GAGGTTTCAC 540
CATGTTGCCT AAGCTAGTCT AAAACTCCTA GGCTCAAGTG ATCCTCCCGC CTCAGCCTCC 600
CGAAGTACTG GGATTGCGGG TGTGAGCCGC TGTGCCTGGC TGCACTTTTC CTTCTAATGG 660
AATGTAAGCG CCACTTTTGT CTGTTATTTT CACTGTAGTA TCCCTAGCCT TTGGAATGTT 720
GCCTGGCAAG TAGTAGGTAC TCAGTAAATA TTTGTTGAAG AAACGGATGA TTCTATAAAT 780
AGCATGGATT GATATGGGAA AGCTATGTAG GTGGATGGAT GGATGCTTGT CGGATGGAGG 840
GTAGATGAAA GAACAGCGAG AAATTCGAAT 870
|
