| Tag | Content |
|---|
EnhancerAtlas ID | HS012-15594 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr19:41112910-41113270 |
Target genes | | Number: 24 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr19:41113156-41113176 | GCACCCACCAACCCCCCACC | + | 6.06 | | RREB1 | MA0073.1 | chr19:41113164-41113184 | CAACCCCCCACCCCCAACCC | + | 6.18 | | RREB1 | MA0073.1 | chr19:41113160-41113180 | CCACCAACCCCCCACCCCCA | + | 6.95 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_23361 | chr19:41112780-41114625 | Colon_Crypt_1 | | SE_23880 | chr19:41112899-41114599 | Colon_Crypt_2 | | SE_24744 | chr19:41112813-41114756 | Colon_Crypt_3 | | SE_26743 | chr19:41105087-41114655 | Esophagus | | SE_31942 | chr19:41112892-41114639 | Gastric | | SE_34376 | chr19:41106131-41114683 | HCT-116 | | SE_35142 | chr19:41107199-41114860 | HeLa | | SE_50342 | chr19:41112849-41114801 | Sigmoid_Colon | | SE_52682 | chr19:41107240-41114649 | Small_Intestine |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I040606 | chr19 | 41112681 | 41114310 |
|
Enhancer Sequence | CCTCCCAAAG TGCTGGGATT ACAGGCGTAA GCCACTGCGC CCAGCTCTCC CAGACTTTCT 60
GGAATCCTTC TCAGACCCCC AAATCCTCTC GTCCCCCTCA ACGACTCGAC TATCTTCAGA 120
TCTTGAGATC CTTCTCAGAG TCTCTCATTC ACCACTGACA CCCCATTGAG GCTCCAAGCC 180
CTTCTCAGAC CTCCAGAGCC CACTGCTCTC CTTCAGACCC TCTCAGACCT CTCCCAAATG 240
CCCCTCGCAC CCACCAACCC CCCACCCCCA ACCCCAGAAC CATTCCCCTC TCTCCCAAAT 300
CCCTCAGTGC TACAGCATTC CCAGCCCCGC CCTGAAGGAT TTCCTCCCTG CTCCTCGCAG 360
|
